Coregonus clupeaformis (lake whitefish): 121544742
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Entry
121544742 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121544742
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121544742
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121544742
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544742
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121544742
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121544742
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121544742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_13
EF-hand_1
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
121544742
NCBI-ProteinID:
XP_041710792
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All DBs
Position
29:complement(13973593..13984581)
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AA seq
455 aa
AA seq
DB search
MSNDTVVHWNELLKRRLASSKKDERTEEEKKAEETELFTKFYTEWRGGGNRENYRNIPRF
YYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQVPPMTGEEAMIS
YDSFLKVGEKAGVKCKQFFTARVYAKLLHSDPYGRISIMQFFNYVMRKVWLHQTRIGLSL
YDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIK
IQDILACSFLDDLLELRDEELSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEELS
RYGTGTLTSVFLDRVYQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDMENKG
YLNVFALNYFFRAIQEQMKIHGQESVSFQDVKDEIFDMVKPKDPYKITLQDLVNSSQGDT
VTSILIDLNGFWTYENREVLVANDNDSNTADLDDT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgatacggtagtacattggaatgagcttttgaaaagaagattggcatcctcc
aagaaagatgagaggactgaggaggagaagaaagcagaagagacagaactcttcactaaa
ttctacacagagtggaggggaggaggcaacagagagaactacaggaacattccacgcttc
tactacaggctgcctgcagaggatgaagttctcctgcaaaagctgcgagaggagtccaga
gccgtctttctgcagaggaagagccgggagcttctggacaatgaggagttacagaacctg
tggtttctgctggacaaacatcaagtgccacccatgacaggagaggaggcgatgataagc
tatgacagttttctaaaggttggagaaaaagcaggagtaaagtgcaagcagttcttcaca
gccagagtatatgccaaacttctccacagtgatccatatggcaggatatcaattatgcag
ttctttaactatgtcatgagaaaagtgtggcttcaccagacaaggatagggctgagtctc
tatgacgtggctggacagggctacctccgcgagtctgacttggagaactacattttagag
ctgatcccaacgctccctcagctggatggcctggagaagtctttctattccttctatgtc
tgcactgctgtccgcaagtttttcttcttcctggatcccctacggactgggaagattaag
attcaagacatcttggcctgcagctttttggatgatctgctcgagctgagagatgaggag
ctttccaaggagagccaggaatccaactggttctctgcaccctctgctcttagagtttat
ggtcagtacctgaatcttgataaggaccacaacggcatgctcagtaaggaggagctgtct
cgctacggcactggcactctgaccagcgtctttctggaccgcgtgtaccaggagtgcctc
acctacgacggagagatggactataagacatacctggactttgtcctggctctggagaac
aggaaggagcctgcagcgctgcagtacatcttcaagctgctggacatggagaacaagggc
tacctcaacgtcttcgctctcaactacttcttcagggccattcaggagcagatgaaaatc
catggccaggagtcagtatccttccaggatgtcaaggatgagatctttgacatggtgaag
ccaaaggatccctacaagatcacgttgcaggatctagtgaacagcagccaaggagacaca
gtaaccagcatcctcattgatctcaacggattctggacttatgaaaacagggaagttctg
gttgctaacgacaacgacagcaacacagctgaccttgacgatacatga
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