Coregonus clupeaformis (lake whitefish): 121544772
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Entry
121544772 CDS
T08357
Name
(RefSeq) syntaxin-binding protein 6 isoform X1
KO
K08519
syntaxin-binding protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544772
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121544772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3-PIP2_bind
Synaptobrevin
RNase_J_b_CASP
DRC7_C
Motif
Other DBs
NCBI-GeneID:
121544772
NCBI-ProteinID:
XP_041710841
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Position
29:complement(18665873..18803884)
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AA seq
247 aa
AA seq
DB search
MSAKSAINKEVFTPHDEKMLVAVQVKRRTKKKIPFLATGGQGDYMTFICLSVTNKKPSHV
SITKVKQFQGSSSFAKRSMWTIDQLRQVNGCDPNRDCPEFDLVFDNAFDQWVAGSAGEKC
TFIQILHHTCQRYSSQSKPEFVNCQPKLLGDDETVDSVAFRCKVFLNRMRKEVVINSRRQ
GRQLLLEGNSILHSAADSVTSAVQKASQALNERGERLGRAEEKTGEMKNSAEQFAVTAHK
LAMKHKC
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagtcagccatcaacaaagaggtgttcacaccccacgatgagaagatgctg
gtggctgtgcaggtgaagaggaggaccaagaagaaaatcccattcctggctactggagga
cagggagactacatgaccttcatctgtctctcagtgacgaataagaagccgtcccatgtg
tccatcaccaaggtgaagcagttccagggctcctcgtcctttgctaagaggtcaatgtgg
accatagaccagctgagacaggtcaacggctgtgaccccaacagagactgtccggagttt
gacttggtgttcgacaatgcctttgaccagtgggtggctggttcggccggtgagaagtgc
acctttatccagatcctccaccacacctgccagcgctacagctctcagagcaagccagag
tttgtcaattgtcagcccaaactgctgggagacgatgaaacagtagattcagtcgctttc
cgttgcaaggtctttttgaacagaatgaggaaagaagttgttataaacagtcgacggcaa
ggtcggcagctacttttagaaggtaacagtatactccactctgcagcagacagtgttacc
agcgctgtacagaaggccagccaggcgctgaacgagcgaggggagcggttaggccgggct
gaggaaaaaacaggggagatgaagaacagtgctgagcagtttgccgtcactgcacacaag
ctggctatgaagcacaagtgttaa
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