Coregonus clupeaformis (lake whitefish): 121544784
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Entry
121544784 CDS
T08357
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121544784
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121544784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121544784
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121544784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121544784
NCBI-ProteinID:
XP_041710861
LinkDB
All DBs
Position
29
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AA seq
444 aa
AA seq
DB search
MDPVRAAAPLLWFSLCFGNIVEAAVLGSLQHPSSADDNGLVSHLDEQSRRKPTVVSRKEP
PINDTIVPHDYMVSLYRTLSEIEKRGLNSSVPRAASHANTVTSFVDQGKDHASWGSRQRY
LFDLSSLSRTDELVEAELRILRKPPLDLLPVLTWGGNLYRLLLYTCSSEGNSGRRLLDSR
RVDVLDREHPKWDVFDVWASVKARRRSHRTAAGNDLLVACFDLLIVSELTKEAANPLTVG
LGRRSRQPQERALLVAFSRTRRKENLFKEIREQMKTVRRDLGFLDPLDLSGDVVGHLPRR
RRRRTALTSRSIGGAGGGGGEGGGGGAGGGRGGGGGGRRKTRCSRRPLHVNFKELGWDDW
IIAPLDYEAHHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPDSSPPSCCVPSKLSPISIL
YIDSGNNVVYKQYEDMVVESCGCR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttagggctgctgctcctttgctatggttttccctgtgctttgggaatatt
gtggaggcagcggtacttggatcattgcagcacccctccagcgcagatgataacgggctt
gtttcacatctggatgagcagagtcggcgaaagccgaccgtggtgtccaggaaagagcct
ccgataaatgatactatcgtcccccatgactatatggtatctctatacaggacactctct
gagatagagaaaagagggcttaacagcagtgttcctcgcgccgcaagtcacgccaacacc
gtgaccagtttcgtggatcaaggaaaagatcacgcctcctggggaagtcgccagcgctat
ctcttcgacctctccagcctgtccaggacagatgagctcgtggaggcagaactgaggatc
ctgagaaagccaccgctggatctccttcctgtgctgacgtggggcgggaacctttatcgc
ctcctcctctacacatgttcctctgaggggaactctgggagacggctgctggactccagg
agagttgacgttctggaccgcgagcatcccaaatgggatgtctttgacgtgtgggccagc
gtgaaggctcggcggaggagccacaggacagcagcaggcaacgacctcctcgtggcctgc
tttgacctgctgatcgtttcggagttgaccaaagaggcagccaaccctcttacagtaggg
ctgggacgccggtctcggcagccccaggagagggccttgctggtggctttttctcgcacc
cgcaggaaagagaacctgttcaaggagatcagggagcagatgaagacagtgcgaagagac
ttgggttttctggaccctttggacctctctggtgatgtggttggtcacctacccaggcga
cgccgacgccggactgccctcaccagccgatctataggcggagctggtgggggaggaggg
gaaggtggtggtggaggagcgggaggaggaaggggcggtggaggcggggggcgcaggaag
actcgctgcagccgtaggccgctccacgtcaacttcaaggagttgggctgggacgactgg
atcatcgcaccgctagattacgaggcgcaccactgtgagggcgtgtgcgactttccgctg
cgctcacacctggagcctacaaatcacgccatcattcagacacttatgaattctatggac
cctgactccagcccgcccagctgctgtgtcccctccaaactcagccccatcagcatcctc
tacattgactctggcaacaatgtggtctacaagcagtatgaggacatggtggtggagagc
tgtggctgcaggtag
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