Coregonus clupeaformis (lake whitefish): 121544791
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Entry
121544791 CDS
T08357
Symbol
utp25
Name
(RefSeq) U3 small nucleolar RNA-associated protein 25 homolog
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121544791 (utp25)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121544791 (utp25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
DUF6077
Motif
Other DBs
NCBI-GeneID:
121544791
NCBI-ProteinID:
XP_041710873
LinkDB
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Position
29:complement(19747155..19753674)
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AA seq
763 aa
AA seq
DB search
MGKRKQKNQIFNNLSKKQKKHLKEFGEEHPFHDIVTEKAEKTQILDLPDSPVQSSAESDE
DDETEQKSAYQKLLSTLSSHADHESEDESVDGEEEHLSEEGSDGDGEEDEEYQEAGYYLT
VTPKEADEEEAGPNEGGEDAMEDETAGGVEFEDKEHESQFCLENNFCGEGEQEGAESTAK
QEDKEDPFKLHLDTEISEEDVTRITAGTKVKTQVKWPKLGTLLCSSPLEKFGPAGQEKDK
RPLALHKVLETNWTSLNQTSNPKGAVEEVSPLQLELLSLMGSYRDVYFPESSPLTKGRQV
RSAYCLHALNHVLKANSGVLGHNAQMRENQAADKAVGNKARVEPQDEPRDQGLTRPKVLI
LVPFRDGALRVVQTLISLLETKGRKMDVSNKKRFKDEFGEEPVDTPPNLFRPDDYTAIFS
GNIDDHFRIGVSILRRSIRLYAPFYSSDIIIASPLGLRTVLGVEGESKRDFDFLSSIEIL
VVDQADVFLMQNWEHLLHVMKHLNLQPLDPHGVDFSRVRMWNLNNWAKYYRQTLVFSSIQ
DPQINNIISKHCFNYRGQVATKNMPITGSICQVLVQLPHVFQMIKSYSFMDQDARFQFFV
DKVLPQYRDSVMSHTLIYVPSYFDYVRLRNYMKKEEMNFASICEYSTKSEVSRARHFFQK
GDKQFILFTERFHFYKRYTIKGIQNLIFYGLPSYPHFYSEVCNMLQAGGQGEEASWTCTA
LYSRYDAQRLAAITGAQRAAQMLQSQKPVHLFITGEEKGPLGP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagaaaacagaagaatcagatcttcaacaatttatcaaaaaagcagaagaag
catctgaaagaatttggggaggagcatccattccatgatatagtcacagaaaaggcagag
aaaacacaaatattggatctgccagacagcccggtgcagtccagtgctgaaagtgacgag
gatgacgaaactgagcaaaagtcagcataccagaagttgttgtcaactctaagcagccat
gcagaccacgaaagcgaagatgagagtgtagatggtgaagaagagcatctcagtgaagaa
ggcagtgatggagatggtgaggaagatgaggaatatcaagaagcaggatattatttgact
gtgacaccaaaagaggcagatgaggaggaagcaggaccaaatgaagggggtgaggatgct
atggaggacgaaacagcaggaggagtggagtttgaggacaaggaacatgagtctcagttc
tgtctggagaacaacttctgtggagaaggagaacaggagggcgcagagagtactgctaaa
caagaggacaaggaagacccctttaagctgcaccttgacacagagattagcgaggaggac
gtaacaaggatcactgctggcactaaggtcaagactcaggtcaagtggccaaaactgggc
accctcctctgctcttcccctctggagaaatttggtcctgccggccaggagaaagacaaa
aggcctcttgcactccacaaagtcctggaaactaactggacgtctctgaaccagacctcc
aacccaaagggggccgtggaggaggtcagtccactgcagctggagctgctgtctctcatg
ggttcctacagggacgtgtacttcccagagagctcaccactcaccaagggccggcaggtc
cgcagtgcctattgcctccacgcactcaaccacgtgctgaaggccaactccggcgttctg
ggtcataatgcccagatgagggagaaccaagccgcggacaaggccgtggggaacaaggcc
agggttgagccacaggatgagccccgggaccaaggcctgacccgacccaaggttctgatc
ctggtgccattccgagatggagcgctgcgtgtggtccagaccctcatcagcctcctggag
accaagggcaggaagatggatgtcagcaacaagaagaggttcaaggatgagtttggagag
gagccagtggacacgccgcccaacctcttcagaccagatgactacaccgccattttttct
ggcaacatcgacgaccacttcaggataggcgtgtccatcttgaggagaagcattcggctc
tatgcacccttctactcttctgacatcatcatagcgtctccgctgggcctgcgtacggtg
ctgggggtggagggcgagtccaagcgggactttgactttctgtcctccatcgagatactg
gtggtggaccaggctgacgtcttcctcatgcagaactgggagcacctactgcatgtgatg
aagcatctgaacctgcagcccttggacccccatggggtggacttctccagggtgcgcatg
tggaacctgaacaactgggccaagtactatcgccagacactggtgttcagctctatccag
gacccacagatcaacaacataatctctaagcactgctttaactaccgtggccaggttgcc
acaaagaatatgcctataacaggctccatctgccaggttctggttcagctccctcatgtc
ttccagatgatcaagtcttacagcttcatggaccaggatgcaaggttccaattctttgtg
gacaaggtcctgccccagtacagggactcggtcatgtcccacacgctcatctatgttccc
tcatacttcgactacgtccggctgcgcaactacatgaagaaggaggagatgaactttgcc
agcatatgcgagtactcgaccaagtcagaggtgtcccgcgccaggcactttttccagaag
ggagataaacagtttattctcttcaccgaacgcttccacttctacaagagatacaccatc
aagggcatccagaacctgatcttctatgggctgccttcctaccctcacttctacagtgag
gtgtgcaacatgctgcaggcagggggccaaggagaggaggctagctggacttgcacagcc
ctctactcccgctacgacgcccagcgcctcgctgccatcaccggggcccagagggccgct
cagatgctgcagtcccagaagcctgtacacctgttcatcactggagaagagaagggccct
ctgggcccctaa
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