Coregonus clupeaformis (lake whitefish): 121544806
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Entry
121544806 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544806
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121544806
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
V-set
LRRNT
LRR_R13L1-DRL21
LRR_Zer-1
LRR_LRWD1
LRRCT
Big_2
Big_6
Sp38
Receptor_2B4
LRR_6
Motif
Other DBs
NCBI-GeneID:
121544806
NCBI-ProteinID:
XP_041710898
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All DBs
Position
29:20233592..20257287
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AA seq
611 aa
AA seq
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MWRSALYHCHPLLGGALLLLLASCALGCPARCDCSAQSKSVSCHRKRLSTIPEGIPIETR
LLNLSKNKLRSITPDNFSSFLQLEDLDLSDNQIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGISTMKPYSFKRLPRLRHLEIDYWPWLEV
LPALSLHGLNLTTLSVTNTNLSSFPGPALRNLPYLTHLNLSFCHIQHIQQGVLDQLPRLQ
ELHLRGAQLVYIEPLAFLGLPALRMLDVSHNQLDSVERAVFKSPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERLRGKPLLDLKEPLVTRYVICTKPRIGPNTTQ
LLLADEGKPVRLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTDGTLEIKAAELHDS
GVYLCVASNAAGNASLSASLAVKSLGISDRSLYDNKIGLLADSNGTWANGTVLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEATET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgctccgccctttaccactgccaccctctactgggtggggctctgctgctcctg
ctggctagctgcgccctgggctgccccgcccgctgcgactgctccgcccagagcaagtca
gtcagctgccaccgcaagcgcctgtccaccatccctgagggcatccccatcgagacccgg
cttctgaacctgagcaagaacaagctgcggagcatcaccccagacaacttctcctccttc
ctacagctggaggatctggacctcagcgataaccagattggcgtggtcgaaccgggctcc
ttcaaatttcagctctccctacgctcgctgaacttccacagcaacctcctccagctggtt
cctgccggcgtgctctcaggcctggccaacctcactagtctggacctcagccacaaccgt
ctagtggtgctgctggaccacggcttccaggaccttcggaggctgatgtccctggaggta
ggcgacaatgagctggtgttcatctcccagagggccttcaccggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgtggtgcccaccgacgccctggggcacctg
cacagcctggtggagctccgcctgcgccacctgggcatcagcaccatgaagccctattcc
ttcaagagacttccccgccttcgccacctggagatcgactactggccctggttggaagtc
ttacccgctctgtcactacacggcctcaacctcaccacgctctctgtcaccaataccaac
ctgtcttccttccccggccctgctctacgcaacctgccctacctcacgcacctcaacctg
tccttctgccacatccagcacatccagcaaggggtgctagaccagcttccgcgactgcag
gagttgcacctgcgaggggctcagctggtttacattgaacccctggccttcctgggcctc
ccagcactgcgtatgttggacgtgtcccacaaccagctggactctgtggagcgagctgtg
ttcaagtcccctgacagcttgcagacgctgctcatgggggggaaccctctggtgtgcgac
tgccggctcctatggctactgagtggccggaagccacccttgctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcctccgtgggaaacccctgctggacctcaaggag
ccgctggtgacacggtatgtgatctgcaccaagccccggattgggcccaacaccacccag
ctgctgctggcagacgaggggaagcctgtccggctcaactgcattgcagacggggctcct
cggccctccatggcctgggtgacgccacacagacggtatgtcacagccaagagcaccggt
agggtgacggtccataccgacggaaccctggagatcaaagctgcggagctgcacgatagc
ggcgtgtacctgtgtgtggccagcaacgcggcgggcaacgccagcctgtcggcctcactg
gcggtgaagagtctgggcatcagcgacagatcactctacgacaacaagatcggactcctg
gcagactccaacgggacctgggccaacgggaccgtcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagcaatgggctgcctgtccttcctgggcgtggtc
atcttctgtttcctgctcctgtttgcatggagtcgtgggaagggaaggcacaagagcaac
tttgacatcgagtacgttccccgtaaatcgaacgggacagcagcggaggcaactgagaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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