Entry |
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Name |
(RefSeq) transcription factor IIIB 90 kDa subunit
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KO |
K15196 | transcription factor IIIB 90 kDa subunit |
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Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cclu03021]
121544829
Transcription machinery [BR:cclu03021]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121544829
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
29:20911912..20967873
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AA seq |
676 aa
MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGDGFCTGVGRESQAQTLQNGRRQINTVGHQLQLNQHCMDTAFNFYKMAVCK
RLTRGRRVTHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIGDVQGEIHEYQDEIEMELEQSRPKLRGMYASCSKAGPQEEEDDEIS
LPDGEEREDEELKAVAQHLNKDLCDQVISGEEEEEDGEGQEERPPRRGPSLASLLGPMPT
AASLGLPESISKCIGEEKENDGDNENGELDLSGIDDDEIEMYLLNDKEVKIKTALWMKQN
EDYLKEQKEKEERIAKEKELGIYKEKKPKSSGSKKRAPIHASTANEAIEKMLEQKKISTK
INYDILKELNIKPSASPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSTLGKRL
WPFISAQPPKKLALDQKANPLPVASEVVPHSVLVESGPVVYDDVADEEEEDEEEPCVSAM
ELLGGNEYGCDDDDGF |
NT seq |
2031 nt +upstreamnt +downstreamnt
atgagttcaagagtgtgtaagaactgtgggggcacggacatcgatgtggaccaggccagg
ggcgatgccgtgtgcgtgggctgtggctcggtcctggaggacaacattatcgtatccgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctcaggaaggaaccccacttttggggatgggttctgtacaggcgttggaagggag
tcccaggcccagaccctgcagaacgggagacgtcagatcaacacagtgggccaccagttg
cagctgaaccagcactgcatggacacggcattcaacttctacaagatggctgtgtgtaaa
cgcctgacacggggccgaagggtgacccacgtggtggctgcatgcctctacctggtctgc
aggacggaagggacacctcacatgctgcttgacctcagtgacctcttgcaggtaaatgtt
tacgtcctgggtagaaccttcctggtcctggccagagagctctgcatcaatgcccctgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggagtttggggagaagaac
cacgaggtgtccatgacagcactgagactgctgcagaggatgaaaagagactggatgcac
acaggacggagaccctcaggactgtgtggtgcagccctgttggtcgctgcgcgcatgcac
gagttccgccggaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
agaaagaggttgaatgagtttgaggacacgcccaccagccagctgaccattgaggaattc
atgaaagtggatctcgaccaggagtgtgacccgccctctttcattgctggccagaggaag
aaaagaatgaagctgcttgaggaagagttggagaagaagattggcgatgttcaaggtgaa
atccatgagtaccaagatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctgttcaaaagccggcccccaggaggaagaggatgatgaaatatct
cttcctgatggggaggagagggaggacgaagagctgaaggctgtggcccagcacctcaat
aaggacctgtgtgaccaggtgatctctggagaggaggaggaggaggatggagaggggcag
gaggagagacctccacgcagaggcccatcgctggcctccctcctggggcccatgcccacc
gcagccagcctgggcctcccagagtctatcagcaagtgcatcggagaggagaaggagaac
gatggggataatgaaaatggagagctggacctgagtggtattgatgatgatgagattgag
atgtatctcttgaatgacaaagaggtgaaaatcaagactgcgctttggatgaaacagaat
gaagactacttgaaagagcagaaagaaaaggaagagcggatagcgaaagagaaggagctg
gggatttacaaggaaaagaagcccaagagctcgggctccaagaagcgggctccgatccat
gccagcacggccaacgaggccatagagaagatgctggagcagaagaagatctccactaag
atcaactacgacatcctgaaggagctgaacatcaagcccagcgccagtccagcccgccag
acagcagagtccccgaaaggagccacccctggagcccagaggctgactggacgataccgt
aaacctaccaacgtccctctgagcctgggcacaccactcagcaccctgggcaagaggtta
tggcccttcatatcagcacagccccctaagaagctggctctagaccagaaagccaacccc
ctgccggtggcctctgaggtggtgccccactctgtgctggttgagagtgggcctgtggtc
tatgatgatgtggcagatgaggaagaggaggatgaggaggagccctgcgtcagcgccatg
gagctgctgggaggcaacgagtatggatgtgatgacgatgatggattctag |