Coregonus clupeaformis (lake whitefish): 121544829
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Entry
121544829 CDS
T08357
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121544829
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121544829
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
121544829
NCBI-ProteinID:
XP_041710951
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All DBs
Position
29:20911912..20967873
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AA seq
676 aa
AA seq
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MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGDGFCTGVGRESQAQTLQNGRRQINTVGHQLQLNQHCMDTAFNFYKMAVCK
RLTRGRRVTHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIGDVQGEIHEYQDEIEMELEQSRPKLRGMYASCSKAGPQEEEDDEIS
LPDGEEREDEELKAVAQHLNKDLCDQVISGEEEEEDGEGQEERPPRRGPSLASLLGPMPT
AASLGLPESISKCIGEEKENDGDNENGELDLSGIDDDEIEMYLLNDKEVKIKTALWMKQN
EDYLKEQKEKEERIAKEKELGIYKEKKPKSSGSKKRAPIHASTANEAIEKMLEQKKISTK
INYDILKELNIKPSASPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSTLGKRL
WPFISAQPPKKLALDQKANPLPVASEVVPHSVLVESGPVVYDDVADEEEEDEEEPCVSAM
ELLGGNEYGCDDDDGF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagagtgtgtaagaactgtgggggcacggacatcgatgtggaccaggccagg
ggcgatgccgtgtgcgtgggctgtggctcggtcctggaggacaacattatcgtatccgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctcaggaaggaaccccacttttggggatgggttctgtacaggcgttggaagggag
tcccaggcccagaccctgcagaacgggagacgtcagatcaacacagtgggccaccagttg
cagctgaaccagcactgcatggacacggcattcaacttctacaagatggctgtgtgtaaa
cgcctgacacggggccgaagggtgacccacgtggtggctgcatgcctctacctggtctgc
aggacggaagggacacctcacatgctgcttgacctcagtgacctcttgcaggtaaatgtt
tacgtcctgggtagaaccttcctggtcctggccagagagctctgcatcaatgcccctgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggagtttggggagaagaac
cacgaggtgtccatgacagcactgagactgctgcagaggatgaaaagagactggatgcac
acaggacggagaccctcaggactgtgtggtgcagccctgttggtcgctgcgcgcatgcac
gagttccgccggaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
agaaagaggttgaatgagtttgaggacacgcccaccagccagctgaccattgaggaattc
atgaaagtggatctcgaccaggagtgtgacccgccctctttcattgctggccagaggaag
aaaagaatgaagctgcttgaggaagagttggagaagaagattggcgatgttcaaggtgaa
atccatgagtaccaagatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctgttcaaaagccggcccccaggaggaagaggatgatgaaatatct
cttcctgatggggaggagagggaggacgaagagctgaaggctgtggcccagcacctcaat
aaggacctgtgtgaccaggtgatctctggagaggaggaggaggaggatggagaggggcag
gaggagagacctccacgcagaggcccatcgctggcctccctcctggggcccatgcccacc
gcagccagcctgggcctcccagagtctatcagcaagtgcatcggagaggagaaggagaac
gatggggataatgaaaatggagagctggacctgagtggtattgatgatgatgagattgag
atgtatctcttgaatgacaaagaggtgaaaatcaagactgcgctttggatgaaacagaat
gaagactacttgaaagagcagaaagaaaaggaagagcggatagcgaaagagaaggagctg
gggatttacaaggaaaagaagcccaagagctcgggctccaagaagcgggctccgatccat
gccagcacggccaacgaggccatagagaagatgctggagcagaagaagatctccactaag
atcaactacgacatcctgaaggagctgaacatcaagcccagcgccagtccagcccgccag
acagcagagtccccgaaaggagccacccctggagcccagaggctgactggacgataccgt
aaacctaccaacgtccctctgagcctgggcacaccactcagcaccctgggcaagaggtta
tggcccttcatatcagcacagccccctaagaagctggctctagaccagaaagccaacccc
ctgccggtggcctctgaggtggtgccccactctgtgctggttgagagtgggcctgtggtc
tatgatgatgtggcagatgaggaagaggaggatgaggaggagccctgcgtcagcgccatg
gagctgctgggaggcaacgagtatggatgtgatgacgatgatggattctag
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