Coregonus clupeaformis (lake whitefish): 121544855
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Entry
121544855 CDS
T08357
Name
(RefSeq) lateral signaling target protein 2 homolog isoform X1
KO
K24780
lateral signaling target protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121544855
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Others
121544855
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Gene cluster
GFIT
Motif
Pfam:
FYVE
PI3K_1B_p101
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
121544855
NCBI-ProteinID:
XP_041710995
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Position
29:complement(22415809..22454928)
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AA seq
988 aa
AA seq
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MNRFRKWLYKPKRTDPQLLAQFYYADEELNQVATELDSLDGRKDPQRCTLLVNQFRSCQD
NVLNIINQIMDECIPGDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELES
MAMRPLAKDLTRSLEEVRNITRDQALRDLNFYTDRMRDALRHFDSLFAEFELSYVSAMVP
VKSSKEYYVQQEVIVLFCETVERALKLGYLSQDMIDDYEPALMFTIPRLAIVCGLVVYCE
GPLNLDRKPEDMSELLRPFRTLLKKIRDLLQTLSEEELLTLERSLCISQDGEFPLVPERP
PTPAPTITPDPPSSSSPTSDTPEGGSEKEQQQEVLSLCISHIQEEDREWEEVKRAKEQGS
LCEEVEEADLACSMQYDEEEIEQLNMMVYRVGDEMSTLLSPPSQGQSPAHRPNRGGSSGG
SSTEASPLRVLVGRGRTGLYQEEEDRVFFMEDLDAGGDIVTSSRLTSPSKAPQPCRPGPL
TDSTRNGWPTDAQSDPSQQPQNLPPQCPSTKRPGLEPLPYTNGWEVGLEGGETAEVIAHR
MGGMKLSATVIFNPGSPSLTELAVDKLLLPHPPSSSETEPCGPLVATHCLLNSCVCCGSC
EEGHDDALTMDTTGLGMGLGLDKHCKPPPPHSPVIQSSACRLASSGHNLHGKGDSPPQLM
PPSSRCSSELPPGEEEGDQRCDKCQVVVAPGHQQGLGQDSSPNGVRGAPEPCVHQWRTVR
RPQASRGRDRDRTGTREADGESKEESKNNTSFFQDSPLSSVSSSDCESVSVTTCSLSSSA
YTASPVSSLTMSSGTSEDLDHHEIQLALQAAKMATRNKIRSRFHSSSDLIHRLFVCISGV
ADQLQTNYAADLRSILKTLFEVMATSEQGDNDKQKAGPGLRSAVLEDCALCQETISSSEL
AAKAREGQFEDPPDWVPDEECDSCIACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPR
YGQVKPVRVCTHCYMFHVTPFYSDKTGI
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggtttcgaaagtggctttacaagcctaagaggacggaccctcagctcctggcc
cagttctactatgctgatgaggagctcaaccaagtggccacagaactggacagcctggat
ggcaggaaggaccctcagaggtgtaccctgctggtcaaccagttcagatcctgtcaggac
aatgtgttgaacattatcaaccagatcatggatgaatgtatccctggtgacagagccaac
agagacttctgtgtcaagttcccagaggagattcgccatgacaacctggcaggacagctg
tggtttggggctgagtgtctggctgcaggctccatcatcatgaacagggagctagagagc
atggccatgaggcctctagccaaggacctgacccgtagtctggaggaggtccgcaacatc
acgcgagaccaggccctcagagacctcaacttctacaccgaccgcatgagggacgcgctg
cgccacttcgacagcctcttcgctgagtttgagctcagctatgtgtcagccatggtgcct
gtgaagtcttccaaagaatactatgttcagcaggaggtgattgtgctcttctgtgagact
gtggagagggcactcaagctgggctatctcagccaagacatgatcgatgactatgaaccc
gctctgatgtttaccatccccagactagccattgtgtgtggtctggtggtgtactgtgaa
ggtccgcttaacctggataggaaaccagaggacatgtctgagctcctccggccttttcgc
actttactgaagaagatcagggacctgctgcagaccctgtcagaggaggagttgttgacg
ctggagcgtagcctttgtatctctcaggacggggagttccctttggtccctgagcgcccc
cccaccccagcccccaccatcaccccagaccccccctcatccagcagccccaccagcgac
acccccgagggggggagcgagaaggagcagcagcaggaggtgctgtctctgtgcatttcc
cacatccaggaggaggaccgggagtgggaggaggtgaagcgggcgaaggagcagggttct
ctgtgtgaggaggtggaggaggcagacctggcatgctcaatgcaatatgatgaggaagag
atcgaacagctcaacatgatggtgtaccgtgtgggggacgagatgtccacgctgctgtcc
cctcccagccagggccagtccccggcccaccgccccaacagagggggctccagcgggggc
tccagcaccgaagcctcccccctccgggtcctggtgggccggggaagaacaggtctctac
caagaggaggaggacagagtcttcttcatggaggacctggacgcaggaggggacattgtg
accagcagccgtctgacctcgccttccaaagcccctcagccctgcaggcctggccccctg
acagactcaaccaggaatggctggcccactgacgctcagtcagatccgtcccagcagccc
caaaacctgcccccacagtgccccagcaccaagcgacccggcctggagcccctgccctac
actaatggctgggaggtgggcctggaggggggcgagactgctgaagtcatcgcacaccgt
atgggagggatgaagctctcggccacagtcatcttcaaccccggctcccccagcctgact
gagctggctgtggacaagctgctcctgccccaccccccctcctcctcagagacagagccc
tgtggccccctggtggccacccactgcctgctcaactcctgtgtctgctgcggcagctgt
gaagagggccatgatgacgccctcaccatggacaccacagggctggggatgggcctgggg
ttggacaaacactgcaagccccctccgccacacagccctgtcatccagtcctctgcctgt
cgcctggcctcctcaggacacaacctacatgggaagggggactctcccccccagctgatg
cccccctcctcccgctgctcctcagagcttcctccaggggaggaggaaggggaccagcgc
tgtgacaagtgccaggtggtggtggccccaggacatcagcagggcctgggccaggacagc
agccccaatggagtaaggggagccccagagccctgtgtccaccagtggaggacagtgagg
aggcctcaggccagcaggggaagggacagggacaggacggggaccagagaggcagacggg
gagtccaaggaagagagcaagaacaacactagtttttttcaggactctcctctcagctca
gtctccagtagtgactgtgagagtgtgtctgtcaccacatgtagtctgtccagcagtgct
tatacagccagccctgtcagcagtctgaccatgagctcagggacgtcagaggatctggac
caccatgagatccagctggccctgcaggctgctaagatggccaccaggaacaagatccgc
tcgcgcttccacagcagcagtgacctcatccaccgcctcttcgtctgcatatcgggtgtt
gctgaccaactgcagacaaactacgcggctgaccttcgaagcatcctgaagacactgttt
gaagtcatggctacctctgagcagggggacaatgacaagcagaaagcaggtcctgggctg
cgcagcgccgtgctggaggactgtgctctctgtcaggagaccatctcttcctcggagctg
gcagccaaggcccgggagggacagttcgaagatcccccagattgggttcctgatgaggaa
tgcgactcctgcatcgcctgtaaggcccccttcaccgtcatccgcaggaagcaccactgt
aggagctgtggcaagatcttctgctctcgctgctcctcccactcagccccgttaccgcgg
tacggccaggtgaagcctgtcagggtgtgtacgcactgctacatgttccacgtcacaccg
ttctacagcgacaagactggcatctga
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