Coregonus clupeaformis (lake whitefish): 121544889
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Entry
121544889 CDS
T08357
Name
(RefSeq) histone deacetylase 3 isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544889
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121544889
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121544889
HDAC complexes
SMART complex
121544889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121544889
NCBI-ProteinID:
XP_045065390
LinkDB
All DBs
Position
3:33585171..33592820
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AA seq
428 aa
AA seq
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MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHAPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagaacagcatatttttatgatccggacgtgggcaactttcattatggtgct
ggtcaccctatgaaaccccatcgtctctctctgacgcacagccttgttttgcactatggc
ctatacaaaaagatgcaggttttcaaaccatacaaagcctcccaacatgacatgtgccga
ttccactcagaagattacattgactttcttcagaaggtcagccccaacaatatgcagggc
ttcacaaagagtctcaacaccttcaatgtgggggatgactgccctgtattcccgggcctg
tttgagttctgttccaggtataccggagcgtcactacagggagcaacacagctaaatcac
aagatatgtgacattgccatcaactgggctgggggtcttcatcatgctaagaaatttgag
gcctctggattttgctatgtaaatgacattgtcatcagtatactggagcttttgaaatac
cacccacgtgtgctctacatagacattgacattcaccatggcgatggggtgcaggaagcc
ttttacctgactgatcgggtcatgactgtatccttccacaagtatgggaactacttcttc
ccaggcacaggtgacatgtatgaggtaggggctgagagcggccgttactactgcctgaac
gtgcctctccgggatgggatcgatgaccagagctacaggcaactgtttcagccagtcatc
aagcaagtggtggacttctaccagccaacctgtatcgttcttcagtgtggggctgactct
ctgggctgtgaccgactaggatgcttcaaccttagtatacgaggccatggggaatgtgtg
gagtttgtaaagagcttcaggattcccctgctggtgctgggaggaggagggtacacagta
cgcaatgtggccagatgctggacctatgaaacctccctcctggttgatgagccaattagt
gatgagctgccctatagtgagtactttgagtattttgcgccagacttcacgctccaccca
gacgtcagcaccaggatagagaaccagaattcaagacagtacctggagcagatacgttct
acagtctttgagaacttgaagatgttgaaccacgcccccagtgtccagatccacgacgtg
ccctcggacatcctgagctacgagcgtactgacgagggagacccagacgagaggggatca
gaggacaactattccaggccggaggcagccaatgagttctatgatggtgaccatgacaac
gacaaggagagcgacgtggagatttga
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