Coregonus clupeaformis (lake whitefish): 121544919
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Entry
121544919 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121544919
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121544919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
EGF_2
EGF_TEN
EGF_DL_JAG
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
121544919
NCBI-ProteinID:
XP_041711103
LinkDB
All DBs
Position
29:24875973..25056758
Genome browser
AA seq
2185 aa
AA seq
DB search
MCDCQKDSTGGRQEMWEQLRELARSQGHSAVGAKDAVAAIPSRESSLRSSHNVSHSGRGA
PVSSSSQRDNRHATAIKPVPAPSTEASHRADDATVPRDAARRAATELGTHHSSQQRPRIS
SRQSNKHSSTHTRRLAGPNVCGGHQCCSGWAVASGTNRCIKPDCQPPCQNRGSCSRPHTC
VCRSGFQGARCEEAAPEQVYIHTRGSLRRIQPGTNPFQREQPRRRPTERQAIDNPSPRAQ
TPRPATTRQPLQPVTQVRRGPANSSSPQQTGTSRTVKRYPSSTGPITSNALPNGNGHDIG
NGNGHSSNGHRPTSNGHTNNAVAPAGANLTSNLDRIKIVFTPMVCRRVCSGGRCYNSCKK
GDTTTVYSENQQQHQPPKTQGFRLFFCQIPCLNGGRCIGRDQCWCPTNSTGKFCHLPAPP
PARPTPSRKDGSLAGRNSSSHSMYTLPLSNQQASLHPSLVNVHIQHPHEAEVQIHQVARV
KPGQRPPVAEGAHSVQQRSQPGNGHTRPHNRQNGYVGRCFQETVDGQCGKPLPGLTKQDD
CCGSVGASWGLNKCTECPTKPAYAVIANGQVECPKGYKRMNMTHCQDINECLMNGICKNA
ECLNTRGSYRCTCKPGYMLDPARSHCVSDKAVSDQRGMCYRSASAGTCSLPLTQHITKQI
CCCSRVGKAWGTACKRCPLPDTDHFKEICPAGHGYTYSRSDVQISLRQLEEEELRRTGIS
WEAQDPSHTQQPQQPAQPPQQLPHIPQTPQIPQYPYHHQPHQPQHPQHPQEILHHPQTPQ
YPLQSHTPHHPQHPQELPQYPQMPQIPQYPHTPQQPQHPLHPDSDIQHPAGETPSQPQDV
EILNPPPVVTYSPLKYPVDVVEKVTPDSPINLGPESEGQDTASINVATQVTDIDKCSITP
TICGHGLCVPVQTGYTCYCDPGYKLSALQTNCIDVNECEGDPCGGKGRCVNTFGSYTCHC
YSGYSQVITQNRKFCQDINECDMANKCQDGDCVNTEGSYTCECKSGYAKSWKGQCEDVDE
CRDPSSCPSGRCVNSPGSFHCQACGPGFRAASGRCLDVNECLDQSVCTHGRCVNSEGSYS
CNCYQGYQASLDNSSCQDVDECLLPGACLHGRCVNLDGSHRCSCNTGYQTTPDGRACEDV
DECATPVCPAGICTNTEGSYSCKNCRPGFQRSADGQRCEDVDECSNADMCLGGVCANTEG
SFTCTRCKDGYKVSQDRHRCEDIDECQSRSVCANGICLNSEGSYSCITCPSGYSISLDGE
LCEDIDECELHTTCPRGTCTNTEGSFTCTTCGSGYRVTEDGLECEDVDECLVANVCPGQL
CRNSPGSFSCRSCGTGFTLSEDGSYCQDINECLSPGVCPMGVCSNTEGSYSCMTCDLGFT
LAPNGLSCEDINECLSPGVCPMGVCSNTEGSYSCMCDLGFTLAPNGLSCEDINECLSPGV
CPMGVCSNTEGSYSCMTCDLGFTLAPNGLSCEDINECEDHGLCLGGQCTNSPGSYSCSCP
PGLEMVDGTSCRDVDECQSGGICGDGDCLNTEGSYLCICPDGYTTGTTDGIGCQDVDECS
KDGVCSHGQCLNTDGSYICLCEAGFKYSADTADCEDQNECKEFGSSVCGTWRCENTIGSY
RCFMGCQPGLYGEDNPDCDIDECVNETICGDHGFCENTDGSYRCQCDRGYTNPPGDAGAH
SCVDVNECEMSTALCGEALCENVDGSFLCICPSDNEEFDPITSQCRPQGEDAPPKPASHT
EELRKECYYNLNDANFCDNVLSRNTTKQECCCTVGAGWGDDCEIHPCPVPGREEYDQLCP
HGSGLLPQAVSSQSLEQQSFKDVDECTMFGPDICKNGRCSNNFSSYSCFCRTGFYYDNIR
LECLDYDECLTEKACVDGVCVNTPGSFNCFCSPPLVLDTTGRRCISVNTTEEAHEPDEDI
HLDICWQGLVDEVMCAQPLIGRRTTYTECCCLYGVAWSEQCAFCPRRDSDDYAAMCNLPR
RRGSDSLRERPGYEYGPGVEGPEGPYVPPYWDNYGGGPITGPGGTYYNPDDTQGIPLFTD
NTNDYGSRERDIEPPLRVPIHRPREFQPRPVDSYNDRYDGFEGLRAEECGILNGCENGRC
VRVREGYTCDCFDGYELDLTKMACIDINECEDISDNVALCKNGACTNTEGSYKCTCLPGF
QASAKPHECIPEVPVSGFRERVAGN
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgactgccagaaggactcaacaggtggtagacaggagatgtgggagcagctccgg
gagctagcgaggagccaaggtcactccgcagtgggagcgaaggacgctgtcgccgccata
ccatccagagaaagctcgctcaggtcctctcataatgtctcgcactccggtcgcggggct
ccggtgagctcatcatctcaacgagataacaggcacgcgacggcaattaaaccagttcca
gctcccagtacagaagcttcgcaccgggcggatgatgccaccgtcccacgagatgctgcg
cgtagagccgcgacagagctcggcacccatcactcatcacagcaaagaccccgaatcagt
tccagacagagcaacaaacacagctccacgcacaccaggcgccttgcagggcctaatgta
tgtggaggtcaccagtgctgctctggatgggctgtggcttctgggaccaaccgctgcata
aagcccgattgccagcccccctgccagaaccgcggctcctgcagtaggccccacacctgt
gtgtgccgctcggggttccagggggcccgctgcgaggaggcagccccagagcaggtgtac
atccacaccagagggtctctgaggcgcatccagccaggcaccaaccccttccagagagag
cagcccaggaggagacctacagagaggcaggccatagacaaccccagccccagggcccag
acccccagacctgctaccaccagacagcctctccaacctgtgacccaagtgaggcgagga
ccagccaattcatcgtctccccagcagactgggacgtctcgcaccgtcaagcgataccca
tcgtccactggccccatcacctccaacgccctgcccaatgggaacggacatgacattggg
aatggcaatggacactcaagtaacggccacagacccacctccaatggccacaccaacaat
gcagtggcgccagcaggggccaacctcacctccaacctggaccgcatcaagatcgtcttc
acccccatggtgtgtcggagggtgtgcagcggcggccgctgctacaacagctgtaagaag
ggtgacaccaccaccgtctacagtgagaaccagcagcagcaccagccgcccaagacccag
ggcttcagactcttcttctgtcagatcccctgtctgaatggcgggcgctgcattggcagg
gaccagtgctggtgcccaacaaactccacggggaagttctgccacctcccggccccccct
cctgccagacccacccccagccggaaggacggcagcctggccggacgcaactcctcctcc
cactccatgtacaccctgccgctgtccaatcaacaagcctctctacacccgtccctggtg
aatgtccacatccagcacccccacgaggctgaggtgcagatccaccaggtagcccgggtc
aagcctggccagagaccccccgtggctgagggggctcattctgtacagcagcgctcccaa
cctggcaacgggcacaccagaccacacaaccggcagaacggatacgtggggaggtgcttc
caagagaccgttgatggacagtgtgggaagcctcttcctggcctgaccaaacaggatgac
tgctgtggaagtgtgggagcctcatggggcctgaacaagtgcacagagtgtccaaccaaa
ccagcgtatgcagtgattgcgaacgggcaagtggaatgccccaagggttacaagaggatg
aacatgactcattgtcaagacatcaacgaatgtctcatgaatgggatttgtaagaacgct
gagtgtctgaacaccagaggaagctacagatgcacctgtaaaccaggctacatgctggac
cctgccaggagccactgtgtttcggacaaggctgtttcggaccagagggggatgtgttac
cgctcagcgtcagcggggacctgttctcttcccctcactcagcacattaccaaacagatc
tgctgctgcagccgtgtgggcaaggcctggggcacggcctgcaagaggtgccctctgcca
gacacagaccatttcaaggagatctgtcccgctggccacggctacacatactcgcgctcc
gacgtgcagatctccctgagacagctggaggaagaggagctgaggaggacaggcatttcc
tgggaggcccaggaccctagccacacccaacagccccagcagccagctcagcccccacag
cagctgccccacatcccacagaccccacagatcccacagtacccttaccaccaccaacca
catcaaccacaacacccacaacacccacaggagatactccaccacccccagaccccacag
taccctcttcaatcccacacgccccaccatccacagcacccccaagagctcccccagtac
ccccagatgccccagatcccccagtaccctcacaccccccaacaaccacaacaccctctc
catccagactcagacatccaacatccagctggggagacccccagccagcctcaagatgtg
gaaatattgaacccgcctcctgttgtgacctactccccgttgaagtacccagtagatgtg
gtagagaaagtgactcctgactctcccatcaacctggggcctgaatctgagggccaggac
acagcctccatcaatgtggccactcaggtcacagatattgacaagtgctccatcactcca
accatatgtggccatgggctgtgcgtgccagtgcagacaggctacacctgctactgtgac
cctggctacaagctgagcgcactccagaccaactgcatcgatgtgaatgagtgtgagggg
gacccttgtggagggaagggccgttgtgtgaacaccttcggctcctacacctgccactgc
tacagcggctacagccaggtcatcacccagaacaggaagttctgccaggatataaatgag
tgtgacatggccaacaagtgccaggatggtgactgtgtcaacacggagggatcttatacc
tgtgaatgcaagagtggctacgccaagtcctggaaagggcagtgtgaagacgtagatgag
tgccgggacccaagctcgtgccccagtggaaggtgtgtcaactccccaggctccttccac
tgccaggcctgtggccctgggttcagggctgccagcgggagatgtctggatgtcaacgag
tgtttggaccaatcggtgtgcacccacggtaggtgtgtcaactccgagggctcctacagc
tgcaactgttaccaaggataccaggcctctctggacaacagcagttgccaagatgtggat
gagtgtctgctccccggagcctgcctccatggcaggtgtgtcaatctggatggctcccac
aggtgcagctgtaacactggttaccaaaccactcctgacggcagggcctgtgaagatgtt
gacgaatgtgctacacctgtgtgccccgcgggaatttgcaccaataccgaaggttcctac
tcatgcaagaactgccgacctggattccagcgatcagcggatggacagagatgtgaagat
gtggatgagtgctccaatgcagacatgtgtctgggaggggtatgtgccaacacagagggc
tccttcacctgcacccgctgtaaagatggatacaaggtgtcccaggacaggcacaggtgt
gaggatattgatgagtgccagtctcggtctgtgtgtgctaacgggatctgtctgaactct
gagggctcctactcctgcatcacctgtccctcaggctacagcatctccctagacggagag
ctctgtgaagatattgatgagtgtgagctgcacactacgtgccccaggggaacatgcacc
aacactgagggttccttcacctgcaccacctgtgggtcaggctatagagtgactgaggat
gggctagagtgtgaagatgtggatgagtgcttggtggctaacgtgtgcccaggccagctg
tgtaggaacagtcccggttccttctcctgcaggagctgtggaactggctttaccctgtct
gaggatggctcctactgccaggacataaatgagtgcctgtccccaggggtctgccccatg
ggcgtttgcagcaacacagagggctcctactcctgtatgacctgtgaccttggcttcaca
ctggcgcccaatgggctctcctgtgaagacataaatgagtgcctgtccccaggggtctgc
cccatgggcgtttgcagcaacacagagggctcctactcctgtatgtgtgaccttggcttc
acactggcgcccaatgggctctcctgtgaagacataaatgagtgcctgtccccaggggtc
tgccccatgggcgtttgcagcaacacagagggctcctactcctgtatgacctgtgacctt
ggcttcacactggcgcccaatgggctctcctgtgaagacatcaacgagtgtgaggaccac
ggtctgtgtctgggaggacagtgcaccaacagcccaggttcctacagctgctcctgtccc
ccgggcctggagatggtggacgggacatcctgcagagatgtggatgagtgtcagtctggg
gggatctgtggagatggggactgtctaaacacagagggttcctacctctgcatctgccct
gatggatacaccacaggcaccacagatggaattggctgccaagatgttgatgagtgcagt
aaggatggcgtgtgctcccatggtcagtgtctcaacacggatggctcctacatctgcctg
tgtgaggctggcttcaagtactctgcagatacagccgactgtgaggatcagaatgagtgt
aaggagtttggtagctcagtgtgtggcacctggcgctgtgagaacaccattggctcatac
cgctgcttcatgggctgccagcctggcctgtacggagaggacaacccagactgtgatatc
gatgagtgtgtgaatgagacaatctgtggggaccatggtttctgtgagaacacagacggc
tcctaccgttgtcagtgtgaccggggctacaccaacccccctggtgatgctggtgcccat
agctgtgtggacgtgaacgagtgtgagatgagcacggcactgtgtggagaggccctgtgt
gagaacgtggacggcagcttcctgtgtatctgccccagcgacaatgaggaatttgatccc
atcaccagccagtgccgcccgcagggtgaagatgctcctcctaagccagcctcacacact
gaggagctgaggaaggagtgttactacaacctgaacgatgcgaacttctgtgacaacgtg
ctgtctcgcaacaccaccaagcaggagtgctgctgcacggtgggggctggctggggggat
gactgtgagatccatccctgccctgtaccagggagagaggagtatgaccagttgtgtcca
catggaagtggtcttctgccccaagctgtttcctcccagagcctggaacagcagagtttc
aaagatgtggacgagtgtacgatgtttgggccagatatctgtaagaatggccgttgctcc
aacaacttctcctcgtactcctgcttctgccgtacaggcttctactatgacaacatccgg
ctggagtgtttggattatgacgagtgcctgacagagaaggcgtgtgtggatggggtgtgt
gtcaatacccctggttctttcaactgcttctgtagtccccctctggtcctggacaccacc
ggccgccgctgcatcagtgtcaacaccaccgaggaggctcatgagcctgatgaggacatc
cacctggacatctgctggcagggcctggtagatgaggttatgtgtgcccagcccctcatt
ggcaggaggaccacctacacagagtgctgctgtctctatggagtggcctggagcgaacag
tgtgccttctgccccaggagggactctgatgactacgcagcaatgtgtaacctgccaagg
agacgggggtctgacagtctacgagagaggccaggctatgagtacggtcctggggttgag
ggtcctgaggggccctatgtcccaccctactgggacaactatggaggagggcccatcact
gggcctgggggaacctactacaacccagatgacacccagggcatccccctgttcacagac
aacaccaacgactatggctcacgagagagagacatagagccgccactacgcgtccccatc
cacaggccaagagagttccagcctcgccctgtagactcttacaatgaccgctatgatggc
ttcgaaggcctgcgagcagaggagtgtggcatcctgaacggctgtgagaatggccggtgt
gtgcgcgtgagggaaggttacacctgtgactgctttgatggatacgagcttgacctaacc
aaaatggcctgcatcgacataaacgagtgtgaggacatcagtgacaatgtggcactgtgt
aagaacggggcctgtaccaacactgaggggtcgtacaagtgcacctgcctgcccggcttc
caggcctccgccaagccccatgaatgcatcccagaggtcccagtgtctggctttagagag
agagtggcaggaaactga
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integrated database retrieval system
