Coregonus clupeaformis (lake whitefish): 121544923
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Entry
121544923 CDS
T08357
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121544923 (exd1)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121544923 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF6392
Motif
Other DBs
NCBI-GeneID:
121544923
NCBI-ProteinID:
XP_041711107
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Position
29:25223544..25230028
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AA seq
559 aa
AA seq
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MTMDDFQFMDSFKRKRIKLTLKTATFLGIVQRINANKTVILEDVVDVKNGRKFPGVKLFF
GHEILNVEFPNVTKTDRENSSDHRPEGHLTVAEFQPYRKSLILNEDDESHVNFVVIDEFH
EKFGPAVMLIRKQQVIGIGADGVGTFQHERLCWLQIATKNTVYLFDILLLGARAFKNGLS
MILENSHILKVTHDCRSLAGSLMAQFGVNLTNIFDTQVADILCFYTETGGFLPDRVSTLQ
EVVSLHLKMSSSQLSSLNIKSLLTKEDKAVWYVRPCPLSLLKVMALSVIHLQPLRLVLLD
ALMADYTGLVDSYLSGSREEPVHMQNVGSSSVLELPRELRALEHMRQVRQKWAIDRYPIT
EQGLLERSNPRPLPPSQNGQNTATQRQPDPPVPTAVEPVVLAPVPGQGPAETPRTSNTLW
ASDLHAMTSALTQEAGVLRPVAPSGAPGLLEIVMDTMAGRGRSLLKDPTPPALPVFPSLG
RGLALPIPAAQVPKESPGALKTQAPVGRVEVPVPPGPRPSPVQPFENIPGAGRGLFIQKP
QGLTSPLSLSFSSFRKSHL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggacgactttcaattcatggatagcttcaagagaaagcgcatcaaattgacc
ctcaagactgcgactttccttggcattgttcagcggatcaacgccaacaaaacggtgatt
ttagaggacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattcttt
ggacatgaaattctgaatgtggaatttccaaatgtaacaaagactgaccgagagaactcc
agtgaccacagacctgaaggtcacctgactgtggcagagttccagccttacaggaagagt
ctcatactgaatgaagatgacgagagccatgtcaactttgtggtcattgatgagttccat
gagaagtttggtcctgctgtgatgctcatccggaagcagcaggtgattgggataggagct
gacggggtcgggacgtttcagcacgagagactctgttggctacagattgccactaagaac
acggtgtacctctttgacatcctgttgcttggagcccgggccttcaagaacggcctgtcc
atgatcctggaaaatagccacatattaaaggtcactcatgactgccggagcctcgctgga
tctctgatggctcagtttggagtaaatctcaccaacatctttgacacacaggtggcagat
atcctgtgcttctacacagagaccggtggcttcctgccagacagggtcagtaccctacag
gaggtggtgagcctacatctgaagatgtcctcgtcacaactctcctctctcaacatcaag
tctctgctcaccaaggaggacaaagcggtgtggtacgtgcgtccctgccctttgtccctg
ctgaaggtcatggccctgtcggtgatccacctgcagcctctgagactggtgctgctggat
gccctcatggctgactacacaggcctggtggactcctacctcagcggtagccgggaggaa
cctgtccacatgcagaacgtcggctcgagcagtgttctggagctgcccagggagctgcgg
gcgttggagcacatgcgtcaggtgcgccagaagtgggccatcgaccgttaccctatcact
gagcagggcctgctggagcgctccaaccccagaccccttcccccttcacagaatggccag
aacacagccacccaaagacaaccagacccccctgtccccacagcagtggagcctgtagtc
ctagcaccagtaccagggcagggcccagcagagacaccccgtaccagcaataccctgtgg
gcctctgacctccatgctatgaccagtgccctgacccaagaggctggagtcctcaggcca
gtggctccatcaggagcaccaggactcttggagatagtgatggacacaatggcaggcaga
gggaggtccctgttgaaagacccaacgccacccgccctccctgtgttcccctccctggga
agaggcctggctctcccgataccagcagcccaggtccccaaggagagccccggagccctg
aagacccaggccccagtggggagggtagaggtgcctgtccccccaggcccaagacccagc
ccagtacagccatttgaaaacatccctggtgcagggagaggcctcttcatccagaaaccc
caaggtctcacctctcctctcagtctctcattcagttcatttagaaagagccacctgtga
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