Coregonus clupeaformis (lake whitefish): 121544981
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Entry
121544981 CDS
T08357
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
cclu03083
Polycomb repressive complex
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121544981
03083 Polycomb repressive complex
121544981
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121544981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121544981
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121544981
Histone modification proteins
HAT complexes
HATB complex
121544981
HDAC complexes
Sin3A-HDAC complex
121544981
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121544981
PRC2.2
121544981
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121544981
Heterochromatin formation proteins
Other heterochromatin formation proteins
121544981
Chromatin remodeling factors
NuRD complex
121544981
NuRF complex
121544981
NuRF complex (fruit fly)
121544981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121544981
NCBI-ProteinID:
XP_041711209
LinkDB
All DBs
Position
29:27791415..27795409
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARHMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMEVWQMAENIYNDEDPEGAADT
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaagcagcgtttgatgatgctgtggaggagagggtgataaatgaggag
tacaagatatggaagaagaacacgcccttcctctatgacctggtgatgacccacgccctg
gagtggcccagcctcacagcacagtggctacctgatgtcaccagacctgagggaaaggat
ttcagtgtacacaggctggttcttggcacacacacctcagatgaacagaatcacctggtc
attgccagcgtgcaactgcccaatgacgacgcacagtttgatgcttctcactatgatagt
gagaaaggtgagtttggaggctttggctcagtcagcggtaagatagagattgaaatcaag
atcaaccacgagggagaggtgaacagagcccgccacatgccccagaacccctgcatcatc
gccaccaaaaccccaaccagtgacgtgcttgtctttgactacaccaaacatccctccaaa
ccagatccatctggagagtgcaccccagatctgcgtttgaggggacaccagaaggagggc
tacggtctctcctggaaccccaacctgagtggctgccttctcagtgcttctgatgaccat
actatctgtatgtgggacatcagtgccgttcctaaggaggggaaggttgtggacgctaag
accatcttcactggacacacagctgttgtggaggacgtttcctggcatctactgcatgag
tcgctctttggatctgtagctgatgaccagaaactcatgatttgggacacgcgatcaaac
aatacgtcaaaacctagccatgctgtggacgcccacactgcagaggtcaactgtctgtcc
ttcaacccttacagcgagttcatcctggcctcgggctcagcagataagactgttgctctt
tgggacctgaggaacctgaaactgaagctgcattcgtttgagtctcacaaagatgagatc
ttccaggtccagtggtctcctcataatgaaaccatcctggcctccagtggcacagacaga
cgactcaacgtgtgggacctcagtaaaatcggagaggagcagtcaccagaggatgctgag
gatggtccacctgaactgctgttcattcacggtggtcacacggctaaaatctcagacttc
tcgtggaaccccaatgagccctgggtcatctgctctgtgtctgaggacaacatcatggaa
gtttggcagatggctgagaacatctacaatgacgaggacccagagggagcagcagacact
gaggtccaggcatga
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