Coregonus clupeaformis (lake whitefish): 121545015
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Entry
121545015 CDS
T08357
Name
(RefSeq) homeobox protein Nkx-2.2a isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545015
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121545015
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121545015
NCBI-ProteinID:
XP_041711273
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Position
29:complement(29877292..29893682)
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AA seq
268 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSITGPEEDNEGSETTKNTGVLVQSPLENVQNLPI
KNPFYDSSDNPYTRWLATTDSIQYSLHGLSASSQDSAKSPEPSADESPDNDKETSSNGSD
SGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMK
RARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGFPLSAYSAQTLHQM
QYNAQYSAATTPQFPSAHHLMQTQQWTW
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaaccaacacaaagacgggcttttctgtaaaggacattttggacctccctgac
acgaatgatgaagaaggatctatcactggaccggaggaagataacgagggatcggagaca
acaaaaaacactggagttttggtgcaaagtcctctagaaaacgttcagaatctgcctata
aagaaccccttttatgatagtagtgacaatccttacacaagatggcttgccaccacggac
agtatccaatattcactgcatggtctatcagctagttctcaagactcagccaagtcccca
gaaccctccgcggatgaatcgccagacaatgacaaggaaacttcaagcaacggcagcgac
tccggtaagaagcgaaaaagaagagtgctgttttccaaggcacagacgtacgaacttgag
cgtcggtttaggcaacagagatacctttccgcgccagagagagaacacctcgcgagtttg
attcgcctgacaccaactcaagtgaaaatttggttccagaatcatcggtacaaaatgaag
agagcgcgcgctgaaaaaggtatggaagtgacccatctcccctctccccggcgggtggcc
gtgcctgtcttagtcagggatggaaagccttgtcatactcttaaagctcaggacttggcg
gccacatttcaggctggattccctctctcggcatatagcgcccagacccttcatcaaatg
caatataatgctcagtacagcgccgccaccacgccacaattcccttcagcacatcatttg
atgcaaacgcaacagtggacttggtga
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