Coregonus clupeaformis (lake whitefish): 121545018
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Entry
121545018 CDS
T08357
Name
(RefSeq) hepatocyte nuclear factor 3-beta
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545018
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
121545018
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GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
121545018
NCBI-ProteinID:
XP_041711275
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Position
29:complement(30172714..30175454)
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AA seq
417 aa
AA seq
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MMLGAVKMEGHEHTDWSTYYGEPECYTSVGNMNTGLGMNSMNTYMSMSGMSTTANMTANS
MNMSYVNTAMSPSMTGMSPGTGAMNSMGAGMTAMSAALSPSMSPMTAQPPSMNSLTSYAN
MNAMSPMYGQSSINRSRDPKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLAEVYQWI
MDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYL
RRQKRFKCDGQKKMCKDSGRKTSEGGSNSSSESCNGNESPHSNSSPNDHKRSLSDMKSIQ
AMSPEHAASPVSHSQVHGHLMSQHHSVLAHEAHLKPEHHYSFNHPFSINNLMSSEQQHHK
MDLKTYEQVMHYSGYGSPMAGALSMGSMGKVGLDSSSIPTDASYYQGVYSRPIMNSS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttggagcagttaaaatggaaggacacgaacacacagactggagcacctactac
ggagagcccgagtgttacacctcggttggcaacatgaacacaggcctgggcatgaactca
atgaacacctacatgagcatgtcgggcatgagcaccacggccaacatgacagccaactcc
atgaacatgtcctatgtcaacacggccatgagcccctccatgaccggcatgtcaccgggc
accggagccatgaacagcatgggcgcgggcatgacagccatgagcgccgcgctcagtccc
agcatgagccccatgaccgcgcagcctccgtccatgaactcccttacgtcctacgccaac
atgaacgccatgagccccatgtatggacagtccagcatcaacagatctagggaccccaag
acataccggagaagctacactcacgccaagcccccatactcttacatttccctcatcacc
atggctatccaacagtcccccagcaagatgctgacgctggccgaggtctatcagtggatc
atggatcttttcccgttttaccgacagaaccagcaacgctggcagaactcaattcgccac
tctctatccttcaatgattgtttcctcaaggtgcctagatctccggataagcccggcaag
ggctcgttttggacactccacccggattcggggaacatgttcgagaacggctgctatctg
aggaggcagaagcggtttaagtgtgacggccaaaagaagatgtgcaaggattcaggcagg
aagacatcggagggtggctctaacagcagctcggagagttgcaacggcaacgagtccccc
cattccaactcgtccccgaacgaccacaaaaggtctctgtcagacatgaagtcgatccag
gctatgagtccggagcacgccgcctcaccggtgtcccactcccaggtgcatgggcacctc
atgtcccagcatcactcggtcctcgcacacgaagcgcacctgaaacccgagcatcactac
tcgttcaaccaccccttctccatcaataacctcatgtcctctgagcaacagcatcacaaa
atggacctaaagacttacgagcaggtgatgcactattccggctacggttcccccatggcc
ggggcgctgtccatgggttcaatgggaaaagtaggcttggattcctcgtcaatacccact
gacgcatcttactatcaaggcgtctactccaggcctattatgaactcctcataa
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