Coregonus clupeaformis (lake whitefish): 121545096
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Entry
121545096 CDS
T08357
Symbol
rnf144aa
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545096 (rnf144aa)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121545096 (rnf144aa)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121545096 (rnf144aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
zf-RING_UBOX
Trm112p
Motif
Other DBs
NCBI-GeneID:
121545096
NCBI-ProteinID:
XP_041711421
LinkDB
All DBs
Position
29:complement(38142449..38214419)
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AA seq
296 aa
AA seq
DB search
MTTARYRPTWDLALDPLVSCKLCLGEFPLEQMTTITQCQCVFCTLCLKQYVELLIKEGLE
TAISCPDSACPKRGHLLENEIECIVATEIMQRYKKLQFEREVLLDPCRTWCPSSSCQAVC
QLKEMEVALPQLVQCAVCTLEFCSACKANWHPGQVCSPQENNLPITAFLPGETSSFYKSD
DDDGPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKL
GHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPFVLCCKCKCSKGDDDPLPT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccaggtatcggcccacctgggacctggccctggaccccctggtctcctgc
aaactctgccttggagagttcccactggagcagatgaccaccatcactcagtgccaatgt
gtcttctgtacactgtgcctgaagcagtatgtggaactcctgatcaaagagggccttgaa
actgctattagctgtccagactctgcctgtccaaaacgaggacacttactggaaaatgag
attgagtgcatagtggctacagagattatgcagagatacaagaagctgcagtttgagagg
gaggtgcttctggacccgtgccggacgtggtgcccgtcgtcgtcgtgccaggcagtgtgc
caactgaaggagatggaggtggcgctgccccagctggtgcagtgtgccgtgtgcaccctg
gagttctgctctgcctgcaaggctaactggcaccccgggcaggtctgctcaccccaggag
aacaacctgcccatcaccgctttcctacccggagagaccagctccttctacaagagtgac
gatgacgatggtcccatcaagcgctgtcccaagtgtaaggtgtacatcgagagggatgag
ggctgtgcccagatgatgtgcaagaactgcaaacatgccttctgctggtactgtctggag
tcactggacgatgacttcctcctgattcactatgacaaagggccctgtcgaaacaaactg
ggccactccagggcgtctgtcatctggcacagaacacaggtggtggggatcttcgctggc
ttcggccttctcctgctggtggcctccccctttctcctcctggccacgccctttgtcctc
tgctgtaagtgcaagtgcagcaaaggggacgacgaccccctgcccacctaa
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