Coregonus clupeaformis (lake whitefish): 121545127
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Entry
121545127 CDS
T08357
Name
(RefSeq) YTH domain-containing family protein 2
KO
K20102
YTH domain-containing family protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121545127
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121545127
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
121545127
NCBI-ProteinID:
XP_041711475
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Position
29:complement(43435516..43449163)
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AA seq
621 aa
AA seq
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MSASSLLEQRPKGQGNKVQNGAVTQKDTLNDEFEPYLNTQARQSNAYTAMSDSYMPSYYS
PSIGFSYSLNEAAWSTGGDPPMPYLASYGQLSNGEHHFLPDAMFSQPGPLGSNPFLGQHG
FNFFPSGIDFSAWGNNSSQGQSTQSSGYSSSYAYAPSSLGGAMIDGQSPFTQNEPLNKAP
GMNSLDSLAGLKIGSGAGDMGAPKVVGSGLPGGPLGHGHSQVSGGAPSMPLPLISIAPTK
PASWADIASKPAKPQPKLKTKGGIAGTNLPPPPIKHNMDIGTWDNKGNMPKVSTPQHAPI
PSNGQPPNQASPQPGATVGGTPQLHLSNGQLVAPSAQLGQHQLPPNGQQGMGGQLQLSQG
PPPATQPPQPTRWVPPRNRANGFGDGGVGQSPPNVGVVPVPSEPHPVLEKLRLVNNYNPK
DFDWNPKQGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLGAKGPLYLLFSV
NGSGHFCGVAEMRSPVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENK
PVTNSRDTQEVPLDKARQVLKIIAGYKHTTSIFDDFSHYEKRQEEEECVKKVEVQGSEPY
PSNPNPSRSHYRLQERQGRVK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagcagccttcttgaacagagaccgaaaggccaaggaaacaaagtgcaaaac
ggagctgtgacccaaaaggatactttgaatgatgagtttgagccttacctgaacactcag
gccagacagagcaatgcctatacggccatgtcagactcctacatgcccagttactacagc
ccttccataggattctcttactccctgaacgaggcagcatggtccaccggcggcgacccc
cccatgccttacctggcctcgtatggacagctgagcaacggggagcaccacttcctgccc
gacgccatgttcagccagcccggcccgctgggcagcaaccccttcttgggccagcacggc
ttcaacttcttccccagcggcatcgacttctcggcctggggcaacaacagctctcaggga
cagtccacacagagctctggctacagcagcagctacgcctacgcgcccagctcgctaggg
ggcgccatgatcgacggacagtcccccttcacccagaacgagcccctcaacaaggccccc
ggcatgaacagcttggacagcttggcgggccttaagattggcagtggtgccggggacatg
ggggcgcccaaggtggtgggctccggcctccccgggggacccctgggtcacggccacagc
caggtgtctggtggagctcccagcatgccactgcccctcatctccatcgcccccaccaaa
cccgcctcctgggcggacattgccagcaagcctgccaagccgcagccgaagctgaaaacc
aaagggggcatagcggggaccaacctgccccctccgcccatcaaacacaacatggacatc
ggcacttgggacaacaaggggaacatgcctaaagtgtccaccccacagcatgcgcctatc
cccagcaacgggcagccacccaaccaggcctcccctcagcccggcgccacggtcggaggg
accccgcaactgcatctcagcaacggacagttggtggccccttcggcccagcttgggcag
caccagctcccccccaatgggcagcagggcatgggggggcagctgcagctctcccagggc
cccccgcctgccacccagccccctcagcccactcgctgggtccctccacggaaccgtgct
aacggctttggggatggcggggtggggcagtctccccccaacgtgggcgtggtgccagta
ccttcggagccccacccggtgcttgagaaactgcgcctggtcaacaactacaaccccaag
gactttgactggaaccccaagcaggggcgcgtgttcatcatcaagagctactctgaagat
gacatccaccgctccatcaagtacaacatctggtgtagcacggagcacggcaataagcgg
ctggacgccgcctaccgctcgctgggtgctaagggccccctctacctgcttttcagcgtc
aacggcagtggccacttctgcggtgtggcggagatgcgctcgcccgtggactataacacc
tgtgctggcgtgtggtcgcaggacaagtggaaagggcgctttgacgtgcgctggatcttt
gttaaggacgttcccaacagccagctacggcacatccgcctggagaacaacgagaacaag
ccagtgaccaactcgcgggacacgcaggaggtgcccctggacaaggcgcggcaggtgctg
aagattatcgccggctacaagcacaccacctccatcttcgacgacttctcccactacgag
aagcgccaggaggaggaggagtgtgtgaaaaaggtggaggtccagggaagcgagccgtac
cccagcaacccaaaccccagcaggagtcattacagacttcaggagcgccaaggacgtgtc
aagtaa
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