Coregonus clupeaformis (lake whitefish): 121545146
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Entry
121545146 CDS
T08357
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121545146
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121545146
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
VWA_4
VWA
Motif
Other DBs
NCBI-GeneID:
121545146
NCBI-ProteinID:
XP_041711521
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Position
3:39076254..39110984
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AA seq
912 aa
AA seq
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MPILLFLIDTSASMNQRTYLGTTYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDDPPY
GVKAGWKENHCTFMSELKNLQASGLTTLGYALRAAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSVIITITDGNKLTHTSGVLDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGAAV
ADSEQLGSVPTDESAITQMCEVTGGRSYCVQTQRMLNQCLESLVQKILSGVVIDFEKTGP
DPPLVGEDGVVDTIRPMLSFSPHPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSP
TLPPRSAHPMVHFTCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHMCWQVFVNSSG
KHSDSSQPFGYLKASNTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFEIYL
KTMPPYFLLPLKKALRMMGAPNLISDNMDSGLSYSVISYLKKLSQQAKIESDRLIVSVGR
KAPQETGIKVKNHSNTLSLAHRKDFKQLLQGITGEMPLRLTDINFKEFASFQIALLNKNL
KPQAYRNAYDIPRRNLLDQLTRMRSNLLKTTQKLIRGQDEDYLHSIPVAQMGNYQEYLKM
MPSPLRQIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVMGPQSKKRGVTGDPNSGAALK
RRRSLSPLLCRPQTPPIITNHVVGMGPNGNGAQGQPGLIKPIPVHKGAEGNSVLGTESNG
ESGLGPESGDSWPGGVMDGVGGGTAGLILEEREGERPGMCAEMGDSGEDSGVEDDRLGED
GLDERPPSERQQQNFEGGLSPPDQEGELEGDGDGADQAEPEAVTIAPLDGSNAELRTRVI
KEVRKPGRNYETIFRLLEEVKGHVTIQRYFIYHAIKEAARFKKWVLIQQLETALEEIELQ
LPAAHTNNDHGR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttacttttcctgatagacacgtccgcttctatgaatcagcgcacttatttg
ggtacgacgtatctggacattgctaaaggcgctgttgagatctttatgaagctgcgtgcc
cgagacccggctagtagaggcgacaggtacatgctagttacattcgatgatccaccatac
ggcgttaaggcgggctggaaggagaaccattgtacatttatgagtgaactgaagaacctg
caggcatctggactgaccactctcggttacgccctccgtgcggcctttgacctcctcaat
ctgaaccgcctcgtctccggcatcgacaactatggacagggccgtaacccgttctttctg
gagccatcggtgatcatcaccattacggatggaaacaagctgactcacacctctggagtg
ttggatgagctccacttgcccctgaactctcccctgccaggcagtgagctgaccaaggag
ccctttcgatgggaccagcgtctcttcgccctggtgctgcgtctccccggtgctgccgtg
gccgacagcgagcagctgggcagcgtccccaccgacgagtctgccatcacccagatgtgt
gaggtcactggaggacgatcatactgtgtgcagactcaaaggatgctgaaccagtgtctg
gagtctctggtccagaagattctgagtggtgtcgtcattgactttgaaaagacagggcca
gatccgcctctggtaggcgaagatggtgtggttgacacgatccgccccatgttgtccttc
agcccacatccctggcacagctgccacaagctcatctacgtgcgacccaaccccaagaca
ggggtgcccgtaggccactggcccatccctgagtccttctggccggaccagaactcaccc
actctgcctcctcgctccgcccaccccatggtgcatttcacctgtgtggactgtgagccc
atggtgattgacaagctgccctttgacaagtacgaactggagccctcaccactcacccag
tacatcctagagaggaagtctccacacatgtgctggcaggtgtttgtgaacagtagtgga
aagcacagtgactcatcccagccctttggctacctgaaggccagcaacactctcacctgt
gtcaacctcttcgtcatgccttacaactacccagttcttttgccactccttgatgacctg
tttaaagtgcacaaactgaagccaaacctaaagtggcggcaggcttttgagatctacctg
aagaccatgcctccttactttctcttgccattaaagaaggcactgagaatgatgggagcg
cccaaccttatctccgacaacatggacagtggtctcagctacagcgtcatctcctaccta
aagaagcttagccagcaggcgaagattgagtcggatcgcctgatcgtgtctgtagggagg
aaggcaccccaggagactggtataaaggtgaagaaccactccaacaccctgtccctggcc
caccgcaaagacttcaagcagctgctgcagggtatcaccggggagatgccccttcgcctc
acagacatcaacttcaaggagtttgccagctttcagattgcactgctcaacaagaatcta
aagcctcaggcgtatcggaacgcctatgacatccccaggcggaaccttttagatcagctg
acacggatgcgctccaaccttctgaagacgactcagaaactcatcagaggacaagatgaa
gactaccttcatagtatacctgtggctcagatgggcaactaccaggagtatctaaagatg
atgccgtctcctctgagacagatcgaccctgaccaacccaaacgcctacacacattcggc
aaccccttcaaacaggacaagaaggggatgatgattgacgaggcagatgagtttgtaatg
ggtccccaaagcaagaagagaggggtaacgggggaccccaactcaggggctgctctgaag
agaaggcgtagcctgtcccctttattgtgtcggccccagactccaccaatcatcaccaac
catgtggtggggatggggcccaatgggaacggggcccagggccagcctggcctcatcaag
cccatcccagtgcacaaaggagcagaggggaacagcgtgctaggcacggagagtaacggg
gagagtggtctggggcctgaatcaggggacagctggcctggaggggtgatggacggtgtg
ggagggggcacagctggactcatcctagaggagagagagggggagaggcctgggatgtgt
gcggagatgggggacagcggggaagacagtggcgtggaggacgacaggttaggggaggat
ggcctggacgagcggcccccctcagagagacagcagcagaactttgagggggggctgagc
ccaccggaccaggagggagagctggagggagatggagatggagcagaccaagctgaaccc
gaggcggttaccatagccccactagatggcagcaatgctgagctgcgcacacgggtcatc
aaggaggtccgcaaacctggccgcaactatgagaccatattcaggctactggaggaggtg
aagggacatgtgacgatccagaggtacttcatctatcacgctatcaaggaggctgccagg
tttaagaagtgggtgcttatccagcagttggagacagctctggaggagattgagctgcag
ctgcctgctgcccacaccaacaacgaccacggcagatag
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