Coregonus clupeaformis (lake whitefish): 121545148
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Entry
121545148 CDS
T08357
Symbol
wdr20a
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121545148 (wdr20a)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121545148 (wdr20a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
PD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
121545148
NCBI-ProteinID:
XP_041711518
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Position
29:complement(41952853..41959898)
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AA seq
601 aa
AA seq
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MAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFANVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNLE
HTCGTTVPHYQLLKQGENYSVHTCKSKSTRNPLLKWTVGEGALNEFSFSPDGKFLACVSQ
DGFLRVFNFDAVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFVDCRVIARG
HGHKSWVSVVAFDHYTTSVEDADPMEFSGSDEDFQDQIHFGRDRANSSQSQLSKRNSTDS
RPVQVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPVGGDVSVGGG
VGGGIVNNVSNNPSTNGTNTPDNPLPTPLPRSNSLPHSAATTANSKSSVMDNAIATGASK
FATLSVHDRKERHHEKDHKRNHSMGHISSKSSDKLNILTKTKTDPAKTLGTLLCPRMEDI
PLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWARPGKVGLLSSQNQASSPSGTV
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggagggaaggagatgaacgaaattaaaactcagttcactactcgg
gaaggcgtctataaactcctcactcactccgaatatagccgccccaacagggtgcctttc
aattcccagggttcgaaccccgtcaaagtttccttcgccaacgtcaatgaccagtctggt
aacggcgacagaatctgtttcaatgtgggccgggagctgtacttctacatctacaaaggc
gttcgaaaggcggctgacctgagcaaacctatcgacaagaggatctacaaaggaacacag
cccacatgtcatgacttcaaccacctcacggccacggcggagagcgtctccctgctggtg
ggtttctcggcaggccaggtgcagctcatcgacccaatcaagaaggagaccagcaagctc
ttcaatgaggaaagactaatagacaaatccagagtgacttgtgtaaaatgggtgccaggc
tcagagagtctgttcctagtcgctcattccagtggaaacatgtacttgtacaacttggag
cacacgtgtggcaccacggttcctcactaccagttgctcaaacagggcgagaactactca
gtgcacacgtgtaagagcaagtccacgcgcaaccccttgctcaaatggacggtgggcgag
ggagcgcttaacgagttttccttctcacccgacgggaagttcctggcgtgcgtgagccag
gacggcttccttcgggtcttcaactttgatgcggtggagctgcacgggaccatgaaaagc
tactttgggggtctgctgtgcgtgtgctggagtccagacggaaagtacattgttgcgggg
ggcgaggatgatctggtgaccgtgtggtcgtttgtggactgccgggttattgcacgcggt
cacggacacaagtcgtgggtgagcgtggtggcgtttgaccactacacaaccagcgtggag
gatgcagaccctatggagttcagcggcagcgacgaggacttccaggaccagatccacttt
ggtcgcgaccgggccaacagctcgcagtcccaactctctaagcgcaactccacagacagt
cggccggtacaggtcacatacaggtttggctcagtgggccaggacactcaactctgcttg
tgggacctcacagaagatatccttttcccccacctcccgctttcccggacaagaacgcac
accaatgtgatgaatgctaccagccccccagtgggaggggacgtgtctgtgggaggtggg
gtaggtggtggcatagtgaataatgtgagtaataaccctagcaccaacggcaccaacacc
cctgataaccccctccctactcccctgccacgctccaacagcttaccacattctgcagct
acgaccgccaacagcaagagcagcgtcatggacaacgccatcgccacaggcgcaagcaaa
ttcgccacgctctccgttcacgatcgcaaagagcggcaccacgagaaggaccacaaacgg
aaccacagcatgggccacattagcagcaagagcagtgacaagctcaacatactcaccaaa
accaaaacagaccctgcaaagacactggggacgctgctctgtccccgcatggaagacata
cccttactagagccccttatctgcaaaaaaatagcacatgagagactgactgtcttaata
tttcttgaagactgtatagtgacagcttgtcaggagggatttatttgcacatgggcaagg
cctggcaaagtgggtttattgtcatcccaaaaccaagccagctctcccagtggaactgta
gtatag
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