Coregonus clupeaformis (lake whitefish): 121545201
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Entry
121545201 CDS
T08357
Symbol
abcb6a
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 6a
KO
K05661
ATP-binding cassette, subfamily B (MDR/TAP), member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121545201 (abcb6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121545201 (abcb6a)
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
121545201 (abcb6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTABC_N
ABC_membrane
ABC_tran
SMC_N
AAA
AAA_16
AAA_22
RsgA_GTPase
Rad17
AAA_29
AAA_21
AAA_5
AAA_30
nSTAND3
DUF815
AAA_14
AAA_28
Septin
ABC_ATPase
AAA_15
DUF2304
AAA_18
AAA_23
Motif
Other DBs
NCBI-GeneID:
121545201
NCBI-ProteinID:
XP_041711606
LinkDB
All DBs
Position
29:60445912..60482226
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AA seq
856 aa
AA seq
DB search
MVAVQSYCEASASISEAWLEGGISPCFYFTLVPTVLLTLSFFFGTFHCVCYRRYGTEMEP
KFIPRSRLYGLQLAVSLLLLLQFLGGLVWRATGGGGVGELPGYVVLYGCLSMLGWVWAVA
LLRLERRRVLVRDRTRGHSTVLLLFWAVAFSAENLAFVSWASPYWWWGLENTQQQVEFSL
WLMRYVGTGTLFFLGLKAPGLPRRPYMLLINEDERDVEGSTGQPLLDGAEESLSTWQDFG
QKVRLLVPYMWPKGSMLLQGLVLLCLCLLGLERVINVFVPIYYKNIVNELTDGSSWTTLA
TTVCVYVLLKFLQGGGAGASGFVSNLRSFLWIRVQQYTNRVVQVRLFGHLHSLSLRWHLG
RRTGDVLRSIDRGTSSINSLLSYIVFSIFPTIADIVISIIYFITYFNAWFGLIVFVCMFL
YLTLTIIITEWRTKYRRDMNTQDNNTKSKAVDSLLNFETVKYYNAENYEVNRFEDAILKY
QISEWKTQASLAFLNQTQNLIIGSGLLAGSLLCAYFVQDGKFKVGDFVLFGTYIIQLYTP
LNWFGTYYRMIQNSFIDMESMFKLFTEEEEVKDVVNAGNLLYKLGKVEFENVYFNYIDGK
EILKNVSFTVQPGQTVALVGPSGCGKSTILRLLFRFYDVQGGCISIDGQDISKVKQVSLR
AHIGVVPQDTVLFNDNIRDNIRYGRVSASDHEVEEAAIAADIHEKIQTFPEGYDTQVGER
GLKLSGGEKQRVAIARTILKAPHIILLDEATSALDTQTERNIQASLTKVCSNRTTIVVAH
RLSTIISADQILVLSDGQIAERGRHDELLAKGGLYCDMWMNQQQAQDSDSASDTEAKDRK
SEKLQPPSATAGHRSH
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagtgcaaagctactgtgaggccagcgcttccatctccgaagcctggctggag
ggcggcatctcaccctgcttctacttcaccctggtgcccaccgtcctgcttaccctctcc
ttcttcttcggcaccttccactgcgtctgctaccgccgctacggcaccgagatggagccc
aagttcataccgcgctcgcgcctctatggcctccaactggcagtctccctgctcctcctg
ctgcagttcctgggggggctggtgtggagggcgactggtggaggcggggtaggggaactc
cctggctacgtggtgctgtacggctgcctgtccatgctgggctgggtctgggccgtggcc
ctgctaaggctggagaggaggagggttctggtgagggaccggacgcggggccacagcacg
gtgctgctgctcttctgggctgtggcattctcggcggagaacctggccttcgtctcctgg
gcaagcccttactggtggtggggcctggagaacacacagcagcaagtggaattttctctt
tggttgatgcgctacgtcggcacgggaacactcttcttcctgggcctgaaggctccggga
ttaccacggagaccgtacatgctcctgatcaacgaggacgaacgtgacgtggagggcagc
actggccagcctctgttggatggggcagaggaatccctgtctacctggcaggactttggg
cagaaggtgcgtctgctggtgccctacatgtggcccaaaggcagcatgctgttacagggc
ctggtgctcctctgcctgtgcctgctgggtctggagagggtcatcaatgtctttgtgccc
atctactacaagaacatcgtgaatgagctgactgatggaagcagctggacgaccttggcc
accactgtgtgtgtctacgtcttgctgaagttcctgcaaggtggaggggcaggtgcgtcc
ggcttcgtcagtaacctgcgctccttcctgtggatccgcgtgcagcagtacaccaaccgg
gtggtgcaggtgcgtctgttcggccacctgcactcattgtcgctgcgctggcacctgggc
cggcgcaccggggacgtcctgcgtagcatcgaccgcggcacctcctccatcaatagcctg
ctcagctacatcgtattcagcatcttccccaccatcgcagatatcgttatctccatcatc
tacttcatcacctacttcaacgcctggttcggactcatcgtattcgtctgcatgttcctc
tatctcacccttaccatcatcatcacggaatggaggaccaagtacaggcgagacatgaac
acccaggacaacaacaccaagtccaaggcggtggactccctgctcaactttgagacggtg
aagtactacaacgcagagaattacgaggtgaaccgttttgaggacgccatcctgaagtat
cagatctcagaatggaagacacaagcctctctagccttcctgaaccagacccagaacctg
atcatcggctcaggcctactggccgggtcactgctctgtgcctactttgtccaggacggc
aagtttaaggttggagactttgtcctctttggcacctacatcatccagctctacacccct
ctcaactggtttggaacctactacagaatgatccagaactcctttatcgacatggagagc
atgtttaagctcttcacagaggaagaggaggtgaaggatgtggtgaatgcagggaacctt
ctttataaactgggaaaagtggagtttgagaatgtgtactttaattacattgatgggaag
gagatccttaagaacgtatcattcactgtgcagccaggccagactgttgcattggttggc
ccgtcagggtgtggtaagagcaccatccttcgcctgctcttccgtttctatgacgtccag
gggggatgcatcagcatcgatggccaggacatctctaaggttaagcaggtgtctctgcgt
gcccacatcggtgtggtgccccaggacacggtcctcttcaacgacaacatccgtgacaac
atccgctacgggcgcgtctccgccagcgaccacgaagtggaggaggcggctatcgccgca
gacattcatgagaagatccagacgttcccagaaggatatgacacccaggtgggcgagagg
ggtctgaagctgagtgggggggagaagcagagggtggctatcgcccggacaatcctcaag
gcccctcacatcatcctgctggatgaggccacatctgctctagacacacagacggagcgc
aacattcaggcgtcgctcaccaaagtgtgctccaatcggaccaccatcgtcgtggctcac
aggttgtcaaccatcatcagcgccgaccagattcttgttctaagtgacggtcagattgca
gagcgaggacggcatgatgagctgctggctaagggagggttgtactgtgacatgtggatg
aatcagcaacaggcccaggactcggactcagcctctgacacagaagccaaagacagaaag
tctgagaaactacagcccccatcagccactgcaggccacaggagccactga
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