Coregonus clupeaformis (lake whitefish): 121545210
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Entry
121545210 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit gamma-3
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121545210
04082 Neuroactive ligand signaling
121545210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121545210
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121545210
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121545210
NCBI-ProteinID:
XP_041711617
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Position
29:63193385..63245098
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AA seq
462 aa
AA seq
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MTTKLLVSFLLLSVQRVRSDPDPRDYDGDYEDTTVNQMLAPKNHQAEATLILNNLLKDYD
KTLRPDIGVKPTLIDVDIYVNSIGPVSSIDMEYQIDIIFAQTWIDSRLQYNSTMKILTLN
SNMVGMIWVPDTIFRNSKNADSHWITMPNQLLRIWNDGKILYTLRLTINAECQLQLHNXP
MDEHSCPLVFSSYGYPKDEMIYKWKRNSIETSDQKYWRLYQFDFMGLRNTTDVLKTTAGD
YVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINSDAAPARTALGITTVLTMTTL
STVARTSLPRVSYVTAMDLFVTVCFLFVFAAMMEYAIQNYYAYRTQKPHYNKTNKTKRLE
MAFLCPLPQTYSMLDMGPGSPTTVVPLNNNYSYWQDYEDVYECLDGKDCQSFFCCYEECK
GGGWRKGRIHVDIKELDAYSRVFFPTSFLLFNIVYWVSYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaagttgctggtgtctttcttacttctgtcagtccaacgggtgcgttccgac
ccagacccaagggactacgatggggactatgaggacactactgtcaatcagatgctggct
cccaaaaaccatcaggccgaggccacgctcatattaaataacttacttaaggactacgac
aagacactacgccctgatattggagttaaaccaactcttatcgacgttgacatatatgtc
aatagcatcggacctgtatcatcaatagacatggaataccaaattgacatcatttttgca
cagacgtggattgacagccgtctgcaatacaacagcaccatgaagatcctgacgctcaac
agcaacatggtgggaatgatctgggtccctgacaccatcttcagaaactccaagaacgca
gactctcattggattacgatgcccaatcagcttctgcgtatttggaacgatgggaagata
ttatacacgctgaggttgaccatcaatgcagagtgccagctgcagctccacaacnttcct
atggatgagcactcctgtcccctggtcttctctagctatggttaccccaaggatgaaatg
atttacaaatggaaaaggaactccatcgaaacctcagaccagaagtactggcgcctctac
cagtttgacttcatgggcctgcggaataccacagacgtcctcaaaacaacagcaggtgat
tatgtggtcatgacggtgtactttgacctgagcaggagaatgggttatttcaccatccag
acctacatcccctgtatcctcaccgtggtgctctcctgggtttccttctggatcaatagt
gatgccgcccccgccagaacagcactaggtatcaccactgtgttgacaatgaccaccctt
agtacagtggccaggacctccctacccagagtctcctatgtgacggccatggatctcttc
gtcaccgtgtgcttcttgttcgtctttgcggccatgatggagtacgccatccaaaactac
tacgcctacaggacacagaagccccactacaacaagacaaacaagacgaagagactggag
atggccttcctctgtcccctcccacagacctactcgatgctagacatggggcccgggtcc
cccacgaccgtggttccgttgaacaacaactactcgtactggcaggactacgaggacgtg
tacgagtgtctggacgggaaggactgccagagcttcttctgctgttacgaggagtgcaag
gggggagggtggaggaaaggacgcatccatgtcgacattaaggagctggacgcctactcg
agagtcttcttccctacgtcgttcctcctgttcaacattgtctactgggtctcttatctc
tacctttag
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