Coregonus clupeaformis (lake whitefish): 121545211
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Entry
121545211 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121545211
04082 Neuroactive ligand signaling
121545211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121545211
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121545211
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121545211
NCBI-ProteinID:
XP_041711619
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All DBs
Position
29:complement(63133127..63185726)
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AA seq
539 aa
AA seq
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MEPDETHRGMNMYLWWILLQGFWCVYGELPFIADNNAAMLVNWNAVDGNKKLFAIYDTSV
NEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYF
QQYWRDKRLAYLGIPLNLTLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT
VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVTRIEL
PQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN
YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVN
YIFFGRGPQMQKKLAEKAERANNERAAKYDTNRSPQEGGKTSSLKLTKQPNRAKTLRVSQ
SAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVLGFDNTSTGTGVQCRKASRASGPR
HSLDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatgagactcatagaggaatgaacatgtacctttggtggattttactgcaa
ggattttggtgtgtctatggggaacttccattcattgcagacaataacgcagccatgttg
gtcaactggaatgcagtcgatggaaacaagaagttgtttgcaatctatgataccagcgtg
aatgaaccagggaacatgtcgttcgtgaaagagacggtggacaaactattaaagggatat
gatattcgtcttcgaccagactttggaggggcccctgttgcagttggcatgagtatagat
gtggcgagcatagacatggtatccgaagtcaacatggactatacattaaccatgtacttc
cagcagtactggagggacaagaggctggcgtacttagggattccactgaacctcaccctg
gataaccgggtagcagattcactctgggtccctgacacctacttcctgaatgacaagaag
tccttcgtccacggtgtgacggtcaagaaccgcatgatccgtctccacccggatggaacc
gtgctctacggcctgaggatcaccacgacggcagcctgtatgatggacctgaggaggtac
cctctggacgagcagaactgcactctggagattgagagctatggatacacgacagatgac
attgagttctactggaagggaggagacaatgcggtgacgggggtgacacgcattgagctg
ccacagttctccatagtggactacaagctggtgtccagaaatgttgtcttttccacaggt
gcctacccacgactgtctttgagcttcaagctaaagaggaacattggctactttatcctg
cagacctacatgccctcaatcctgatcaccatcttgtcctgggtctccttctggatcaat
tacgatgcctcggctgcaagagtggcattagggatcaccactgtgctcaccatgaccacc
atcaacacccatctgagagagacgctccccaagatcccctacgtcaaggccatcgacatg
tacctgatgggctgcttcgtaatggtcttcctggccctgctggagtacgccttcgtcaac
tacatcttcttcggccgaggaccacagatgcagaagaagctggcagagaaagccgagagg
gccaacaacgagagggcagccaaatacgacaccaataggtctcctcaggaaggaggtaaa
acgtcatctcttaagctgactaagcagcctaatagagcaaaaacactccgtgtctcacag
tcggcggagtcccacggtaacatcctgctgaccaccctggagatccacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcctgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagtcgggcctcgggtcctcgc
cacagcctcgacaggcacgcccagctcaagaggcacaaactgcggcggcgctcgtcgcag
ctcaaaatcaaaatccctgatttgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctctgttttctccctcttcaatttaatctactggatgtactatgtcaactga
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