Coregonus clupeaformis (lake whitefish): 121545279
Help
Entry
121545279 CDS
T08357
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545279
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545279
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121545279
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121545279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
Zf-C2H2_ZNF451_C
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121545279
NCBI-ProteinID:
XP_041711639
LinkDB
All DBs
Position
16:20487977..20493415
Genome browser
AA seq
601 aa
AA seq
DB search
MEESSSHKLVWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFVAL
KSTDKRTAPYIFRVDTSAANSTSDGLMWLRLVQSARDRDEQNLESYVKNGQLFYRSLRRI
EKDEELLVWYGKDLIELLLLSASKAPVKAKGSAPYSCPDCNQRFQFEFPFLAHLRFRCTK
RLQSMAAGSVDEEVHSKEPSTERPNPNTTTTTPTRASPKLGRSEGDSAKPSTDFHNLARD
LENSRTSPPSDREAEIRSESSGKRKFSDVEDRERDGSRASLSLSQSLKSKEELASSAQNY
RGVYGLEENRRGPTFSPPGSGSTESGGEGKRSAFTEVKKSPQSLKTHSGSTKNLQSSNAE
NKDGGRPSPGSNPPQEKHLNIRQVLSETQPPQSQTRMESSPLGSAFTSVVQQGGGNGGQR
KSAFSQPSRHSTSSFSQISPLVMTTPKLLDCHPAVGDTISSSRLYQADHLAAKLHGAELG
ANCPVPGAMSKQSPFLYAAAAATAFWPKSQGPIQLQMPSALTLLPPSFTSLCLPAQNWCA
KCNASFRMTSDLVYHMRSHHKKEFAMEPMVKRRREEKLKCPICNESFRERHHLSRHMTSH
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatccagctcacataagttggtttgggacggcgacgccaaagcagtgcagcag
tgtctaacggatatattcaccagcgtctacaccacgtgtgacattccggaaaatgcaatt
ttcggcccttgtgtattgagccacacgtcgttgtatgacagcatagccttcgtagcactc
aaatcaacggacaaacgaactgcgccgtacatattcagggtggacacgtcagcagccaac
agcacgtcggacggcttgatgtggctgcggctcgtgcagtcggcgcgggaccgggacgag
cagaacctcgagtcctacgtgaagaacggacagctgttctaccggtctctccggaggatc
gagaaggacgaggagctgttggtctggtacgggaaagacctgattgagctgctgctgctc
agcgcgagtaaagcaccggtcaaggccaaggggtccgctccctactcctgtcctgactgc
aaccagcgcttccagtttgagttccccttcctggcccacctgaggttccgctgcaccaag
agactacagagcatggcagcaggcagtgtggacgaggaggtccacagtaaggagccaagc
accgagcgccctaaccccaacactaccaccaccacacccaccagagctagccctaaactg
ggccgctcagagggggacagcgccaaaccctccacagacttccataacctagccagagac
ctggagaacagtcggaccagtccgccgagtgaccgtgaggctgagatccgcagcgagagc
tctgggaagaggaagttctccgatgtggaggacagggagagggatggtagcagggcctct
ctgagtctgtctcagtccctcaagtctaaggaggagctggctagctcagcacagaactat
cggggagtgtacggcctggaggagaatcgacgagggccgacgttctcccctccagggtcg
gggtccaccgagtcgggtggtgagggtaaacgcagtgccttcaccgaggtcaagaagtct
ccacagagcttaaagacgcacagcggcagcaccaaaaacctccagagctccaatgccgag
aacaaggacggaggtcggcccagcccgggcagcaaccctccccaggagaagcatctcaac
atcaggcaggttctgtcagagacccaacctccccagtcccagacccgcatggagtcctct
ccgctcgggagcgccttcacctccgtagtccagcagggtgggggcaatggcgggcagagg
aagagcgccttcagccaaccctcccgccactctacctcctccttctcccagatctctcct
ctggtcatgaccacacccaaactcctggactgccacccggcggtgggcgacaccatctct
tcctccagactctaccaggcagaccacctggccgccaaactccacggcgcagagctgggc
gccaactgcccagtgccaggagccatgtccaagcagagcccgttcctctacgcggcggct
gcagccacagccttctggcccaagagccagggccccatccagctgcagatgccctcagcg
ctaaccttactaccaccctccttcacctctctgtgtctgcccgcccagaactggtgcgcc
aagtgcaacgcctccttccgtatgacctctgacctggtgtaccacatgaggtcgcaccac
aagaaagagtttgccatggagccaatggtcaagaggaggcgtgaagagaaacttaagtgt
ccaatctgtaacgagtcgttcagggagaggcaccacctctcgcgtcacatgacctcccac
aactga
DBGET
integrated database retrieval system
