Coregonus clupeaformis (lake whitefish): 121545330
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Entry
121545330 CDS
T08357
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121545330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121545330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121545330
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121545330
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121545330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAP30
DUF4896
Motif
Other DBs
NCBI-GeneID:
121545330
NCBI-ProteinID:
XP_041711731
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Position
1:22075706..22086722
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
SSQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVSVSEIRESLKWERERACHVLDHLLKEGLAWLDSQASGEPQYWLPALF
SELTSRDVTPEEANQITP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcataggagaggagtaggtgcgggagctatcgccaaaaagaagcttgcagaggccaag
tataaagagagggggacagtgttagctgaggatcaaattgttcagatgtcaaaacagctg
gagaccttcaaatctaaccttgaggaatttgccagcaagcacaaacaagagattcgtaag
agttcccagttccgggtccagtttcaggacatgtgtgccaccattggagttgacccactt
gcctctggcaaaggcttttggtcagagatgcttggtgtgggtgacttctattacgagcta
ggtgtgcagatcattgaagtatgcctggccctgaaacacagaaatggaggacttattacc
ctggacgaactccatcacagagtgttgaagggaaggggaaaatttgctcaggatgtgagc
caagatgacttggtgcgggccataaagaagctgaaagtcatggggaacggctttgggatg
attcctgttggaggctcttacctcgtgcagtcagtgccagcagagctcaacatggaccac
actgtggtacttcagctggctgagaagaagggctacgtttcagtaagtgagatcagagag
agtctcaagtgggagcgagagcgggcctgtcatgtgctggatcacctgttgaaagagggc
ttggcgtggttggattcccaagcttctggagagccacagtattggctgccagccctcttt
tctgagctgacttcccgtgatgtcacacctgaggaggccaatcagataacgccttaa
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