Coregonus clupeaformis (lake whitefish): 121545335
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Entry
121545335 CDS
T08357
Name
(RefSeq) poly(rC)-binding protein 4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121545335
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121545335
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Y2_Tnp
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
121545335
NCBI-ProteinID:
XP_041711703
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Position
30:complement(35575083..35635904)
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AA seq
496 aa
AA seq
DB search
MRLPVCNSHITMNCEQDFGDGVLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDCVFRAFTMITYKLEEDLTTLVANGTISSKPPVTLRLVIPAS
QCGSLIGKGGAKIREIRESTGAQIQVAGDLLPNSTERGVTISGSQDSVIQCVKLICTVIL
ESPPKGATIPYRPSLSPGALLISGNQVFEASDFTPHPLYSVSQGGLDLQQSDLFQAYTVQ
NQYGIPHTELAKLHQLSMQQNMQQNMQQTMQQTMQQTMQQTMQQNVQQNMQQSPMCHQAT
TILPGMDSNPQTSQELLIPNDLIGSIIGRQGTKINEIRQMSGAQIKIGSQLDGTSDRHVT
ITGTPISINLAQYLITSCLETAKSTAQAASMAAPNMADLNMAFTQPVSPASSPHSASTLA
AMSALSPTPVMGHPYGVLPFSGLLGVKSVPFLTLSSPAPQVAVTTAPSHATLAAYTTKIS
SANCIKKPDRQKFAPY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgtgtgcaactcccatatcactatgaactgtgagcaggactttggagac
ggggtcctgggtgtgaccctcacactccgactgctcatgcacggcaaggaggttggcagc
atcataggcaagaaaggagagacggtgaaaagaatacgagaagagagcagtgcacgggtg
aacatctcagagggctcctgtccagagaggatcatcaccatcaccggttctacagactgt
gtcttcagggccttcaccatgattacatacaaactggaagaggatctcactacactggtg
gccaacggcaccatcagcagcaaacccccagtgaccctacgactagtcatcccagccagc
cagtgtggctccctcatcggcaagggaggggccaagatcagggagatcagagagagcacc
ggagcacagatacaggtggcaggggatttgctgcccaactctactgagcgaggggtgacg
atatcggggagtcaggactctgtaatccagtgtgtcaagctcatctgcactgtaatcctg
gagtctcccccgaagggtgctactattccctaccggcccagcctctccccaggagcactc
ctcatctctggcaaccaggtgtttgaggcatcagactttaccccccaccctctgtactca
gtctcccagggggggcttgacctgcagcagagtgatctcttccaggcctacactgtacaa
aaccaatatggcattccacatacagagttggccaagctacatcagctatccatgcagcag
aacatgcagcagaacatgcagcagaccatgcagcagaccatgcagcagaccatgcagcag
accatgcagcagaacgtgcagcagaacatgcagcagagtcccatgtgccaccaggctaca
accattctacctggaatggactcaaacccccagacatcacaggagctccttattccaaac
gatctgataggctcgatcatcggccggcagggcactaagatcaatgagatcaggcagatg
tcgggggctcagatcaagattggcagtcagctagacgggaccagtgaccgccatgtcacc
attaccggcacaccaatcagcatcaacctggcccagtacctcatcacctcctgtttagag
acagctaaatcaacggcccaggcagcgtccatggccgcccccaacatggctgacctcaac
atggccttcacccagcctgtctccccggcctcctccccccactccgcctccaccctggca
gccatgagtgccctctccccaacccccgtcatgggccacccctacggcgttctgcccttt
tccggcctgctaggggtcaagtctgtccccttcctgacactctctagccccgccccccag
gtcgctgtcaccacagccccctcccacgccaccctggcggcctacactaccaaaatctcc
tcggccaactgcatcaagaaacccgacagacagaagtttgcaccctactga
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