Coregonus clupeaformis (lake whitefish): 121545337
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Entry
121545337 CDS
T08357
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121545337
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545337
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121545337
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
Other
121545337
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121545337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
WDR55
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
WAPL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
121545337
NCBI-ProteinID:
XP_045065489
LinkDB
All DBs
Position
30:35421385..35438722
Genome browser
AA seq
1543 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEQWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELILNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQDAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKTLGEPLLPLDEETVDGGFEDTPFPSGNNGTESESD
NEISFHLNYLNSSHKTSSRTSSSVKGLMKPVSAPPSLSHRDFPDGRAEGSSHLKRRAERE
NGRKVKQKLNFSLPEPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEMEQRLILQYLTP
LGEYQELLAVFMQMGACELLIHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAQFVAHGG
VQKLLEIPKPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVSYTLWLLECSHASG
CCHATMFFSISFSYRAVLELFDRQDGLRRLVNLISTLEILNPEDQAALLSDDQIFSSRQT
AKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKACSYTHEQVVEMMEFLI
EYGPVRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVIPKT
QLLMAESVAVPDGEGGNAVSTVGMSVVLVVAEGEVFVNDAEIQKSALQVVINCVCAPDKR
MSSIGKFISGTPRRRLPQTTKSSESVLSKMWNVVQSNNGIKVLLSLLTVKMPITDADQIR
ALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAELIKR
VSGKPLMIGTDVSLAWLQRANVVAQSRISFPEKELLLLIRNHLVAKGLHDTATTLTKEAD
LPMAILPHPSSSALLPVVVPPPPASPAPALPRTPRLANGVAARLASHGSHPSVPLSVQPQ
PRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVFTRERPSPCPVPASCKKPRVLRQKSD
YGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCKNPVTTCPPFSLFTPHQCPEP
KQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHLIFSRFRPMSVFREADEDESGFMCCA
FSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPL
SALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKTLTLNYPDLA
NNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKFDKFNMNISGVFHPNGLEVIVNTEIW
DLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDIMEMQTKTPFGSSFRTFNAT
DYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEEDEDD
QEDDDQDDDDDDDEDDSDDDMDTDPLIAELDNDNGEDEDEDDGNNELSPSDDEEVSHLLE
GDGEEEDDDDDDSDEDDGDLALDNTDSSDNSDLEDDIILSLNE
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgactgctctgctggagcat
tggttggagcagtgggagggggaacagcaggccagcacaccagacctggtcaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgtgtcttgggtcacctgctc
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcattcttaacacggcagcctgtcgcctgctgcagaacatcatgcctggg
ttggagaccgccgtggtctttcaggagaaggagggcattgtggagaggctgtttaaatgg
gcccaggatgctgagcagcccctgaggatctatgctacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctgatg
ctgcagcggttacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaagaccctgggggaacctctccttcctctagatgaggagactgtcgac
ggaggcttcgaggacaccccattcccctcggggaataacggaacagagagtgagtctgac
aacgagatctccttccacctcaactacctcaactcctcccacaagaccagcagccgcacc
agctcgtccgtcaaaggcctgatgaaacccgtgtctgccccaccgtctttgtcccatcgg
gacttcccagacggcagggcggagggcagcagtcacctcaagaggagggcggagagggag
aacggacggaaggtgaaacagaagctgaacttctccctgccggagccggagaggaacttc
agcgagctgtccaacagcagctggtctgagatgagcccctgggtgattgggaacaactat
cacctttaccctttgaccccggagatggagcagaggctcatcctgcagtacctcacccct
ctgggggagtaccaggagctgttggctgtcttcatgcagatgggagcctgtgagctgctc
atccattacatggacctgaagcagaccaacgatgtacagctcacctttgaggctctcaag
tacctggcctccctgctcctgcataagaagtttgcagcccagtttgtggcccatggaggg
gttcagaagctgctggagatccccaagccttccatggccgccacaggggtgtctctgtgc
ctctactacctggcctacaaccaggacgccatggagagggtgtgtatgttgccccactcc
atcctgtctgatgtggtgagctacactctgtggctgttggagtgttcccacgcctcgggc
tgctgccatgccaccatgttcttctccatctccttctcctaccgagccgtgctggagctc
tttgacaggcaggatggcctccgacgcctcgtcaacctgatcagtacgttggagatcctg
aaccctgaagaccaggcggccctgctgagtgatgaccagatcttctccagcaggcagacg
gccaagcacacctgcatggccctgcgcaggtactttgaggcccatctggccatcaaggtg
gagcaggtcaagcagtccctgcagcggactgaggggggcgctcccattcaccctcagcct
tactacaaggcgtgcagctacacccatgagcaggtggtggagatgatggagttcctgatc
gagtacggcccagtcagactgtactgggagccagcagaggtcttccacaagctgtcctgt
gttcagctgctgctgcagctcatctccatcgcttgtgactggaggacctactatggcagg
agtgacacagtgcgttatgccctggacatactgagcatcctgacagtgatcccgaagacc
cagctgctgatggcggagtctgtggctgtgccggatggggaggggggtaacgcagtctcc
accgtgggtatgagtgtagtcctggtggttgcagagggagaggtgtttgtgaacgacgcc
gagatccagaagtctgctctgcaggtggtcatcaactgtgtgtgcgctccggacaaacgc
atgtccagcatcggcaagttcatctcgggcacgcctcgtagacgcctgccccagactacc
aagagcagcgagagcgtgctcagcaagatgtggaacgtggtgcagtccaacaacggcatc
aaggtgctcctgtccctgctgacggtgaagatgcccatcacagatgcagatcagatccgg
gccctggcctgtaaggccctggtgggtctgtcccgctccagctcagtcagacagattatc
agcaagctgcctctcttcagcagcggacacatccagcagctcatgaaggagcctgtgctc
caggacaaacgcagcgaacacgtcaagttctgcaagtttgcggcggagctcatcaagcga
gtgtctggtaaacccctcatgatagggacagatgtgtccctggcctggctgcagagggct
aatgtggtggcccagtccaggatctccttccctgagaaggagctactgctgttaatccgg
aaccacctggtggccaaaggcctgcatgacacggccaccacgctcaccaaggaggccgac
ctccccatggccatcctcccccacccatcttcctcagctttgcttcctgtcgttgtcccc
ccccctcctgcctctcccgcccctgccctcccccggacccctcggctggccaatggggtc
gcggcacgattggcgagccacggctctcatccgtccgtgccgttgtcagttcagccccag
ccccgtccctcgacatcgcaactcctcgcactccctccggccgcccctcccctgttgacc
cctcaccaaagcaacggctctcccctgattggtcggatcgtgttcacgcgagagcgcccg
tcgccttgccctgtgcctgccagctgtaagaagccgcgggtgctgaggcagaagtcagac
tacggtgccttcagccagagtccagccatgaagaaacagctggacagacacctgccctct
ccccccgccctggacagcatcatcacagagtacctgagggagcagcatgcacgctgcaag
aaccctgtcaccacctgcccccccttctccctcttcaccccccaccagtgccccgagccc
aagcagaggcgccaggccccaaccaacttcacctcccgaaacacacgcagggtcgtctac
cccaagtatggaggggtggacgggggctgcttcgacagacacctcatttttagcaggttt
cgtcccatgtctgtgttcagggaggcagacgaggatgagagtgggttcatgtgttgtgcc
ttctctgcccgtgagcggttcctgatgctggggacgtgtacgggccaactcaaactctac
aatgtgttcacaggccaggaggaggctagctacagctgccacagctctgccatcacacac
ctagagccatcacgggatggctctctgttgttgacgtcggcatcatggagttatcccctg
tctgcactgtggggcatgaagtcagtgttcatcatgaagcattccttcttagatgatcat
tatgtggagttcagcaaactctcacaagaccgagtcattggcacaaaggaacacatagct
cacatctatgacatccagacagggcagaagaccctgaccctcaactacccggacctggcc
aacaactacaagaggaactgtgcgacctttaaccccaccgacgacctggtgctgaacgac
ggcgtgctgtgggacgtgcgctcggctcgggccatccacaagtttgacaagttcaacatg
aacatcagtggagtgttccaccccaatggcctggaggtcatcgtcaacactgagatttgg
gacctgcggacctttcacctcctccacacagtgccagctctggaccagtgcaggatcgtc
ttcaacaacaacggcacggtcatctacggagcgatgctccaggccgatgatgaggatgac
attatggagatgcagacgaagactccttttggctcctccttcaggacgttcaacgccacc
gactacaaacccattgccaccattgacgtgaagaggaatatctttgacctctgcacggac
actaaggactgctacctggctgtgattgagaaccaggactcggtcaacacagacacggtg
tgcagactgtacgaggtgggacgccagagactggctgaagaggaggaggatgaagacgat
caggaggatgacgatcaagatgatgacgatgatgatgatgaagatgactctgacgatgac
atggacacggaccctctgatcgctgagctggataacgataacggagaggatgaggacgag
gacgacgggaacaatgaattatctccctctgacgatgaagaggtgtctcacctgctggag
ggggacggagaggaggaggatgacgatgatgatgactcggatgaggatgatggggacctt
gccctggataacacagacagctctgacaactctgaccttgaggatgacatcatcctgtcc
ctgaatgagtga
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integrated database retrieval system
