Coregonus clupeaformis (lake whitefish): 121545341
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Entry
121545341 CDS
T08357
Symbol
slc6a6a
Name
(RefSeq) solute carrier family 6 member 6a isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121545341 (slc6a6a)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121545341 (slc6a6a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121545341
NCBI-ProteinID:
XP_041711716
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Position
30:35277734..35316992
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AA seq
629 aa
AA seq
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MKEIMAQKEKLQCLKDFHKDTLKPSPGKSPGTRPEDEAEGKPIQREKWASKLDFILSVAG
GFVGLGNVWRFPYLCYKNGGGAFLIPYTIFLFGGGLPVFFLEVALGQYTSEGGITCWEKL
CPIFTGIGYASIVIVSLLNIYYIVILAWGLYYLFQCFQPELPWAKCNQPWNTDRCVEDTV
RKNKTLMLAANITNFTSPVTEFWERNVLSISSGIDDIGPLKWDLALCLLAVWIVCFFCIW
KGVKSTGKVVYITATFPFVMLIVLLVRGVTLPGASEGIKFYLYPNLTRLQDPEVWIDAGT
QIFFSYAICLGAMTSLGSYNKYKYNCYRDCLLLGGLNSGTSFVSGFAIFSVLGFMAQEQG
VDIADVAESGPGLAFIAYPKAVSMMPYPTFWAILFFIMLLLLGLDSQFVEVEGQITSLVD
LYPAVLRTGYRREIFIAVMCCISYLLGLTMVTKGGMYVFQLFDYYAASGVCLLWVAFFEC
IAVAWVYGADNFYDAIEDMIGYRPNPWMKWSWTFITPVLCAGCFIFSLVKYKPLTYNKVY
EYPDWSIGLGWSLALASMICIPMVMVIKIFQSDGPLIERIKAVAAPVKGGASSRPKEYSV
KGSELTQPLDPNGNNGLIKPTHTIVETMM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatcatggcacagaaagagaaactccaatgtctgaaggatttccacaaggac
acgctgaagccttcgccagggaagagcccgggcacgcggccggaggacgaggcagagggc
aagcccatccagagggagaagtgggccagcaagctagactttatcttgtctgtggccgga
ggctttgtcggtttagggaacgtgtggcgcttcccgtacctctgctataagaatggtgga
ggtgcatttctcatcccatacaccatcttcctgtttggtggaggcctgccggtgttcttc
ctggaggtggctctgggacagtatacctctgagggaggcatcacctgctgggaaaaactc
tgccccatcttcaccggtattggctatgcctctattgtgatcgtctctctcctgaacatc
tactacatagtgattctagcctggggactctactacctattccagtgctttcagccggag
ctgccctgggccaaatgcaatcagccgtggaacacagaccggtgtgtggaggacacagtc
cgcaagaacaagaccctgatgctggctgccaacatcaccaacttcacctcgcccgtcact
gagttctgggaacgcaacgtgctgagcatctcctctggaattgatgacatcgggccactg
aagtgggacttagccctgtgtctcctggcagtatggatcgtctgcttcttctgcatctgg
aagggagtcaagtccactgggaaggtggtgtatatcacagcaactttccctttcgtcatg
cttattgtgctgctggtgcgtggagtgactctgccaggggcgtccgaaggaatcaaattc
tatctctaccccaacctgacccgcctacaggatccagaggtatggatcgacgcaggaacc
cagatattcttctcctacgccatctgtctgggggctatgacgtcactggggagctacaac
aagtacaaatacaactgctacagggactgtttgctgctgggaggcctgaacagcggtacc
agttttgtgtctggcttcgcaatattttccgtcctgggcttcatggcacaagagcaaggg
gtggacattgccgatgtggcagagtcaggtcctggcctggccttcattgcctaccctaag
gctgtgtccatgatgccctatcccacgttctgggccatcctattctttatcatgcttctg
ctactgggcctcgacagtcagtttgtggaggtggaaggacagatcacctccctggtcgat
ctgtatccagccgtcctaaggacgggttaccgccgtgagatctttatagctgtgatgtgc
tgcataagctatcttttgggacttaccatggtaacgaaaggtggcatgtatgtgtttcaa
ctctttgactactatgcagccagtggtgtgtgccttttgtgggttgcattctttgaatgt
attgctgtagcctgggtttatggcgctgataatttctatgatgcaattgaagacatgatt
ggctaccgaccaaacccatggatgaaatggagctggacctttatcactcccgtcctctgt
gcgggttgttttatcttctcgttggtgaagtacaagcccctgacctataacaaggtgtat
gagtacccagactggtccatcggcctgggctggtctctggccctggcctctatgatctgc
atccccatggtaatggtcatcaagatcttccagtccgacggaccgctcatcgagaggatt
aaggcggtggcggccccagtaaagggaggtgcgagttctcgccccaaagagtacagcgtg
aagggcagcgagctgacccagcctctggaccccaatgggaacaacggcctgatcaagccc
acccacaccattgtagaaacgatgatgtga
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