Coregonus clupeaformis (lake whitefish): 121545350
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Entry
121545350 CDS
T08357
Name
(RefSeq) mimecan
KO
K08126
osteoglycin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121545350
Proteoglycans [BR:
cclu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
121545350
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
121545350
NCBI-ProteinID:
XP_041711726
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Position
30:35030428..35033292
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AA seq
270 aa
AA seq
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MMDLRTLFFTIILVPWMLSSAARNGYMEARKPKKEAVTIPDYDTAGDSDTSPAAAPKDEG
ELPTCLLCVCLTGSVYCEEVSPEMTAVPSLPKETAYLYARYNKITKITNKDFADIATLRR
IDLTGNLISEIEDGAFSKLALLEELNLSENKLAKLPMLPAKLISFNANYNQLKTKGVKST
AFKKLTKMVYLYLGNNELEAIPQLPESLHIVHLYNNKITTLSDETFCQGNNTQYIRANME
EVRLDGNPLMLAKHPNSFVCLRALPIGPYH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatggacctgaggactttgtttttcaccattattctggtgccgtggatgctctcttct
gcagcaagaaatggatacatggaagcaaggaaacctaagaaagaggctgtgaccatccca
gactatgacaccgctggagactcagatacaagcccagcagcagctcctaaagatgagggt
gagctgcccacgtgcctgctgtgtgtgtgtctgactgggtcggtatactgtgaggaggtc
tcccccgagatgacagcagttccatccctgcccaaggaaactgcctatctctacgcacgc
tacaacaaaatcacaaaaatcaccaacaaagactttgcagacattgcaactttgagaaga
atcgatctgactgggaacctcatctctgagatagaagacggagctttctcaaagcttgct
ctccttgaagagctcaatctctcagagaacaagctggccaaactacccatgttacctgcc
aaactcatatccttcaatgccaattacaaccagcttaaaaccaagggtgtaaagtcaact
gcttttaagaaactcaccaagatggtgtacctctaccttggcaataacgagcttgaggcg
atcccacaacttccagagagtctgcacattgtgcacctatataacaataagatcaccacg
ctatcggatgagaccttctgccaaggcaacaacactcagtacatcagagccaacatggag
gaggtgagactggacggcaaccctctgatgctggccaagcatcccaacagctttgtttgc
ctcagggccctgcccattggaccgtaccactga
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