Coregonus clupeaformis (lake whitefish): 121545359
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Entry
121545359 CDS
T08357
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121545359
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GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
121545359
NCBI-ProteinID:
XP_041711738
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All DBs
Position
30:complement(34469076..34651997)
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AA seq
1660 aa
AA seq
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MSKVIQKKNHWITKVTECAVSRDARGELNVELRGGAENGEFPYLGEVREDVLVYKNGQLS
KGELLLEVEGLSVSGLPLYDVLIVMNRCKGPVRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHELQQTIRANLYRHAVPCTTRPPRDREVPGVDYNFLSVEDFLNLEQSGTLLEIGTYEGN
YYGTPKPLRQPVVGTVILSDAVLLDGPPGSQQSTPKRTKSYNDMQNARVVPADYEDDDQA
TEMNNSFTGSLVRSLFPSPLLCTGNPSDQDESRGGVLRPYPARENAPSYGLNNVAATTSD
SGQQTHAQPQASPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWLDPRCLEKPLEPLE
ECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRKQLE
QPQPPEGERYIREWIEEHSSAGAPLAIYPSNHLETYRDPQVPPPLPPAPGGTKRGKPFFT
RNPAELNGIFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIV
SVNDIIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDKEP
IIVNGQQSYDSPSSHGSQTGGPVNGIREPRALSPSAEVTSNGSHGYSSSDVVTLASSIAG
QPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQNM
SHNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLLQQLERKDSQSSSQHSVCSHRSTHT
DSPSHPSSNMPSEAVVPPPAAPTQLLPGLPPLPTQDPGDGTMTLQKKPDPFKIWAQSRSM
YESRQPDCQEQEIFLWRKDTGFGFRILGGNEAGEPIYIGHIVKYGAADEDGRLRSGDELI
CVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVGKGEGDVPPSPASSHHSST
QAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPAALQPYDMEIQRGE
NEGFGFVIVSSVSRPDAGTTLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVNGC
SITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATEPQN
NSKLKQAPPPPPPTQAQPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGA
AVRNGKMRVGDEILEINSESTKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDTSHDG
HSPTPGAQNSPEVRTLPPNSRYYTSSESSYPPDLHKPSRHEDTAQGRDRDRMEHSGRHFN
PHHHHTWKNNHSHTTSRQHSPDNSTSGGNNKKSLGRKVKKSESESGISKLLKTLRKDSSG
KKAAAAAAEKERERGLSASSSTLDQRYSRPRRGSLDRSPTRKRNASPDRRRAKSMDRRAE
RAHRDRTPEREYDDGGFLSHAATPERPLYDRRLLREPQTSGRAYMEATTPERPNNGASSL
SLSRGRMTDMKATTPERPNNGASSQSLSRGRTPDRGSLKNGILLRDSSAERRDESYRING
TPERRYRSERDSSPDSSSSREELNYAAPPAPRLKDYYSTLKNNASAHHQAGHNIAEHSNK
AGQHHNNAAAGHNNAVGRAPNQFPEPKRRFYKESPKDLSI
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaatccagaagaaaaaccactggatcaccaaagttaccgagtgcgcggtg
agtcgggatgctcgcggggagctgaatgtggagctgcgtggcggcgcggagaacggagag
tttccatacctcggggaagttagagaggatgtattggtttataaaaacggacaactgtct
aagggggagttactgctggaagttgagggtctgtcggtgtctggattgcccctctatgac
gtcttgattgtgatgaatcgttgcaagggtcctgtcaggttgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcattacctgagcctgaggtttcagaagtcctcccct
gaccatgagctccaacagaccatcagagctaacctctaccgccatgctgtgccttgtacg
acacgcccccctcgagacagggaggttcccggggttgattacaacttcctgtccgtggag
gacttcctgaaccttgagcagagtggaacactactggaaataggaacttatgaaggtaac
tattatgggacccctaagccgctgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcgacggtcccccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgcccgagtagtgcctgctgactacgaggatgacgaccaggcc
acagaaatgaacaacagttttacaggatccttagtgcgtagtctcttcccctctcccttg
ttgtgcacaggtaaccctagcgaccaggacgagagccgcggaggtgttctacggccatac
cccgcgcgcgagaacgctccgtcctatggtctgaacaacgtggccgccaccacctcggac
agcgggcagcagacacacgcccagccccaggcctccccagaagaccccctaggacccctt
ccagacaactgggagatggcctacaccgagaacggagaagtctactttatagaccacaac
acaaagaccacatcatggctcgaccctcgctgtctggagaaacctctggaacctctggaa
gagtgtgaggatgatgaagaaggggtacatactgaggaaccggacaatgagctagagctg
cctgcaggatgggagaagatagatgacccagtgtatggggtgtactacgtagatcacatc
aacaggaagacccagtatgagaaccccatagtggaggctaagcgtaggaagcagctggag
cagccgcagcctcctgaaggtgagcggtacattcgagagtggatagaggagcactcatca
gctggtgctcccctggccatctatcccagtaaccacctagagacgtaccgtgacccccag
gtcccgcccccactgccccctgccccgggagggaccaaacgagggaagccgttcttcacg
cggaacccagcggagctgaacggaatcttcataaacaccaaactgaagaagagccgccgc
gggttcggctttaccgtcgtcgggggcgacgagccggatgagttcctacagatcaagagt
ctcgtcctggatggtcctgctgctgtggatgggaagatggagacaggtgatgtcatagtg
agtgtgaatgacatcatcgtgcttggctacacccatgcccaggtggtaaagatcttccag
tccatcccaatcggctccatggtggacctggccctgtgccgtggctaccccctgcccttt
gaccccgacgaccccaacaccagcctggtgacctccgtggccatcctggacaaggagccc
atcatcgtcaacggccagcagagctacgactccccgtccagccacggcagccagaccgga
ggccccgttaacgggataagggagccgcgggctctcagcccctcggcggaggtgacgtcc
aacggctctcacggttactcctccagcgatgtggtcaccctggcgtcgtccatcgctggg
cagcccgagctgatcacggtgcacatggagaagggcgataagggctttgggttcaccatc
gctgacagcctgacgggtgggggtcagagggtgaagcagattgtggactacccccgctgc
aggggcctgaaggagtcagacattctgatggaggtgaacaagaggaacgtccagaacatg
agtcacaaccaggtggtggacctgctcagcaagtgtcccagagggagcgaggtcaccatg
ctggtgcagagaggagtggtgccagccaagaggagccccaagctgctgcagcagctggag
aggaaggacagtcagagcagctctcagcacagtgtgtgcagccatcgcagcacccacaca
gactctcccagccacccctcctccaacatgcccagtgaggccgtagtcccccctccagcc
gcccccacccagctgctgcctggcctgcctcccctgcccacccaggaccctggagatggt
accatgaccctccagaagaagccagaccccttcaagatctgggcccaatccaggagcatg
tatgagagcagacagccagattgccaggagcaggagatcttcctgtggcggaaggataca
ggttttgggttccgcatcctgggaggaaatgaggccggggagccgatctacatcgggcac
atagtgaaatatggagcagcagatgaggacgggcgtctgcgttcgggggatgagctcatc
tgtgtggatggcacggcggtggtgggcaagtctcaccagctggtggtacagctgatgcag
caggctgccaagcagggccacgtcaacctcactgtccgacgcaagagctctggatacgga
gtgggtaaaggggagggtgacgtgcccccgtccccagcctcgtcgcaccacagcagcacc
caggccccctccctgacggagggcaagcggaccccccagggcagccagaactccctcaac
acggtcagctccggcagtggctccaccagtgggatcggcagtgggggaggagggggctcc
ggcagtgctgtggtccccgcagccctccagccctatgacatggagatccaacgcggagag
aacgagggcttcggattcgtcattgtgtcgtcggtctccaggcctgatgctgggactact
ttggctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatcgaggggagc
cctgcggaccgctgtgggaaactgaaggttggcgaccgcatcctgtccgtcaacggctgc
tccatcaccaacaagtcccactcggacatcgtcaacctgatcaaggaggcagggaacacc
gtctctctgaggatcattccaggtgacgagtcctccaacgcatctctgttgaccaatgct
gagaagattgccaccatcaccacaacgcacacaccccaaactgccacagagcctcagaat
aactccaagttgaaacaggctcctcctccacctcctccaacacaagctcagccctcacag
gatgcagagttctactctgtggatctggagcgggacagcaaaggctttggattcagcctg
agaggggggcgggagtacaacatggacctttatgtgttgagactggctgaggatggggcg
gctgtcaggaatggcaagatgagggtgggagatgagatcctggagatcaacagcgagagc
acaaagaacatgaagcacgcacgcgccatcgagctgatcaagaatggtggccggagggca
cgcctggtcctcaagaggggcgatggatctgttcctgaatatgacaccagccatgacggg
cactctcccacacccggggcacaaaactctccggaagtgagaaccctgccaccaaacagc
cgatattacacttcatcggagtccagttatccaccagaccttcacaaaccatcacgccat
gaggacactgcgcagggccgagacagggacaggatggagcactcgggccggcactttaac
ccccaccaccatcacacctggaaaaacaaccacagccacaccacctccagacaacactcc
ccggacaacagcaccagcggcggcaacaacaagaagagcctgggccgcaaagtcaagaag
tcggagtcggagagcggcatctcaaaactcttaaagactctgcgcaaggacagctctggg
aagaaggctgcagctgcagcagcggagaaagaacgagagcgagggctctctgctagtagc
agtactctggaccagaggtacagtcgaccgcgccgcggctccctcgaccgctcgcccacc
cgtaaacgcaacgcttcccctgaccgacggcgggccaagtccatggaccgcagggcagag
cgagcacacagggaccgcacacctgagagggagtacgacgacggagggtttctcagtcat
gcagccactcctgaacgaccactctatgaccgtaggctcctgagggaaccacagacctct
ggcagagcctacatggaggccaccaccccagaacgccccaacaacggggcctcctccctg
tcgctctccaggggccgcatgactgacatgaaggccaccaccccagaacggccaaataac
ggggcctcctcccagtctctctccaggggccgcacgcccgacagaggcagcctgaagaat
ggcatcctcctgagggactcgtcggccgaaaggagagatgagagctacaggattaacgga
acaccagagagacgctacaggtcagagagagactcatctccagacagcagctccagcagg
gaggagctgaactatgcagcgccgcctgctcctagactgaaggattactacagcacactg
aagaacaacgcctccgctcaccaccaagccggccacaacattgcagaacacagcaacaag
gcaggacaacaccacaacaacgcagcagcaggacacaacaatgcagtaggccgtgccccg
aaccagttcccagagcctaagagaaggttttacaaagagagccccaaggacctcagcatc
tga
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