Coregonus clupeaformis (lake whitefish): 121545393
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Entry
121545393 CDS
T08357
Symbol
ttll6
Name
(RefSeq) tubulin polyglutamylase ttll6 isoform X3
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121545393 (ttll6)
04812 Cytoskeleton proteins [BR:
cclu04812
]
121545393 (ttll6)
Enzymes [BR:
cclu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
121545393 (ttll6)
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
121545393 (ttll6)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
121545393 (ttll6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
121545393
NCBI-ProteinID:
XP_041711861
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All DBs
Position
1:22099284..22116319
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AA seq
669 aa
AA seq
DB search
MDLRAESPDRDSEDDAFKCGPEGGEEGEGWGSDSQPEACTPTPPSIGKRKKKRKKRLWIN
IVNCKYESVRRAARRYGLWEAVEGEDWTLFWTDCSVSLDRVMDMKRYQKINHFPGMSEIC
RKDLLARNMNRMLKLFPKDYNIFPRTWCLPADYSDFQAYTRSKKHKTYICKPDSGCQGRG
ILLTKSSKDIRPGEHMICQVYVSRPFIIDGFKFDLRIYVLVTSCDPFRIFLYNEGLARFC
TTQYNEPSNGNVDDVCMHLTNYAINKHSENFVRDDDTGSKRKLSTLNKHLEAMCYDTEKM
WLDIEDVIIKTLISAHPILKHNYHTCFPNHAAGSACFEILGFDVLLDHRLRPWLLEVNHS
PSFTTDSRLDREVKDSLLYDTLVLINLGACDRRKITEEEKRRVKERLQQNRSREARSEEL
RQSQAASVEQMRRYEAKHLGGFRGIYPREGGEKYEKYFKHSSSLFQETAASKAREECARQ
QLQELRLKQEQKEREQKGSRRRDLQGESAGERAKPHRVQVRQTSSNSQQVTLLTMPPLPT
ATNGSPTVQDLSEEEVERVSGLLQRENLLRDLGVVDQIYQLLQGRGHSMPDGITPPREQN
ELPLHRHERANKSVLCHILPVGLPETEAPLYCDPTPGASRGQALPAVRPFPAAAAALALA
KSGQGAHSH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcgagcagagagccctgacagagactctgaagatgatgccttcaagtgtgga
cctgaggggggagaggagggcgagggctgggggagcgatagtcaacccgaggcctgcacc
cctactcctccatccattggcaagaggaagaagaaaaggaaaaagagactgtggatcaat
atcgtcaactgcaaatatgaaagtgtgcgacgtgctgctcgcagatatggcctttgggaa
gcagtggagggcgaggactggactctcttctggacagactgctctgtctcactggacaga
gttatggacatgaagcgctaccagaagatcaaccattttcccgggatgagtgagatttgt
agaaaggatcttctggctcgaaacatgaaccgcatgctgaagctcttccccaaagactac
aatatctttccccgaacatggtgcctaccggcagattatagtgacttccaagcttacacc
aggtccaagaaacacaagacttacatctgtaagccagactccggttgccaagggcgaggc
atcttactcactaagtccagcaaagacatccggcccggagaacacatgatctgccaggtg
tacgtctcccggccattcattattgacggcttcaagtttgacctgcgtatctatgtgctg
gtgacctcctgtgaccccttccgcatcttcctgtacaatgaggggctggctcgcttctgc
actacccaatacaacgagcccagcaatggcaacgtggatgatgtttgcatgcatctgacc
aactatgccatcaacaagcacagtgagaactttgtccgtgatgacgacactggcagcaaa
cggaagctgtccaccttgaacaagcacctggaggccatgtgttacgacacagagaagatg
tggttggacattgaggacgtgattattaagacgctcatctctgcccaccccatcctcaaa
cacaactaccacacctgtttccccaaccacgctgctggcagcgcctgctttgagatcctt
ggctttgatgtgctgctagaccatcgactcaggccctggctgctggaggtgaaccactcc
cccagtttcactactgattcgcggttggaccgggaggtgaaggatagcctgctgtatgac
accctggttcttataaacctgggtgcctgtgaccgccgtaagatcactgaggaggagaag
cgcagggtgaaggagaggctgcagcagaaccgctctagagaggccaggagtgaggaactg
cgtcagtcccaggcagccagtgtagagcagatgcggaggtatgaggccaaacacctgggt
ggcttccgcgggatctaccctcgcgagggcggagagaagtacgagaagtacttcaaacac
agcagctccttgtttcaggagactgccgcctccaaggccagggaggagtgtgccaggcag
cagctgcaggagctgcgtctgaagcaggagcagaaggagagggagcagaaggggagccgt
agacgagacttgcagggggagtctgcaggagagagggccaaaccacacagagtacaagtt
cgtcagaccagctccaactcccaacaggttactctcctgaccatgccccccctgcctact
gccaccaacggttcccctacggtgcaggacctctctgaggaggaggtggagagggtgagt
ggactgctccaacgggagaatctactgagggacctgggggtggtggaccagatctatcag
ctgctgcaggggcgaggccactccatgcctgacggcattacacccccccgcgagcaaaat
gagctgcccctacacagacatgaacgagccaataagtctgtcctatgtcatattttgcca
gttggactccctgagaccgaagcgccactgtactgtgatccaacaccaggtgcctccagg
ggccaagcccttccggcagtacgtccattcccagctgctgcagcagcgctggccctggcc
aagtctggacagggggcccactcacactga
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