Coregonus clupeaformis (lake whitefish): 121545394
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Entry
121545394 CDS
T08357
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121545394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121545394
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121545394
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
FYVE_2
RHG20_PH
PH_5
PH_9
Motif
Other DBs
NCBI-GeneID:
121545394
NCBI-ProteinID:
XP_041711820
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All DBs
Position
30:33052141..33176376
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AA seq
924 aa
AA seq
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MQGVSPTTDLPPSSLQYQCGSVDFLCSPRLGKKAPPPPRSCHGRPAVKPCPQPTATPTSQ
KPQVPPKPPHLLALGQDKKPKRIPPAPSRPLPAPPTSPKPRPSQTPPGLATQPQREAQSV
GLLIERFEKSRVPILGVPPKNQLHLCLSMDAMSETTPPSAPDPTAHAPSGSAGAKDSGER
SSADKLAHIVSERTDEVTELMELSRLASFRIDGHKDIPLDSREDHFDVAHGDGVGCLDDA
EREERGSSHELQDNPDSRSLEQNLNGKIPNRDSGIDSPSCAVEGEVFPNEDAIDEEERYD
SITETETSMSCCITQDNKRDSTQDEDSDLDEVSSGETEGGEKTDTHRCSETQRLLNIARE
LLHTEEAYVKRLNLLDQVFCTKLTEAGIPHDVITGIFSNISSIYCFHHKFLLPELKTRIT
GEWDSNPRIGDILQKLAPFMKMYGEYVKNFDRAMDLVNTWSQRSSQFKSVVQNIQKQDVC
GNLTLQHHMLEPVQRIPRYELLLKDYLKKLPDDALDRKDTEKALELISTAANHSNAAIRK
MEKMNKLLEVYERLGGEEDIVNPANELIKEGHIKKMSAKNGTAQDRYLYLFNNMVLYCVP
KLRLMGQKFSVRERINIAGMEVRKEVQENVKQNLPLTFAIIGKQRSLELQASTAEEKEDW
IQVILATIERHKQNSETFNKAFNSSFSREEDHLPDSPGPWSTTSIDSDSERLHERKSSKK
KEKEKQTCKGCNESFNFTKRKHHCKACGAAICGKCSKMLENKTCRVCPECYETSQVPEGP
AGAPGELKKKATAEKQVSLSLLGDNCLLCGQLQVQEKGKSWTKTWVAVTKTDPLVLYLQT
SGQDSRGARAIPLPGFEVNMSAPSATEKSELKHAFRLSNSQQALLFSAQDAEVQDKWVEL
LSRAARGETPTDTPVSLTEHRKSQ
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtttcaccaacaactgacctccctccctcctctctacagtaccagtgtgga
tcggtggacttcctgtgttccccacggctgggaaagaaagccccgccccctcccagatca
tgtcacggtcggcctgcagtcaagccctgcccccagcccaccgccacacccacctctcag
aaacctcaagtgccccctaagcccccgcacctgttggccctcggacaggacaagaagccc
aagaggatccccccggccccctccaggccgttgcctgcccccccaacttcgcccaaaccg
cggcccagccagaccccccctggcctggccacacagcctcaaagagaggcccagagcgtg
gggctgctcatcgagaggttcgagaagtccagggttccgattcttggcgtcccgccgaag
aatcagctccacctgtgcctgagtatggacgccatgtctgagaccacaccgccctctgcc
cctgaccccacagcacacgccccttcagggtcagcaggagcaaaggactctggggaacgc
tcctccgccgacaaacttgcacatatcgtctcggagcggactgatgaggtcacagagctg
atggaactctcacgcctggcctcattccgcatcgacggccacaaggacattcctctggac
tctagggaggaccacttcgacgtcgcccacggcgatggagttggttgccttgacgacgcg
gagcgggaggagagaggctcttcccatgagctccaggacaatccggactctcgctccttg
gagcagaacttaaacgggaagattcccaaccgggacagcgggattgacagtccatcgtgt
gcagtggagggggaggtgttccccaacgaggacgccatcgatgaggaagagcgctacgac
agcattacggagacggagactagcatgtcctgctgcataacccaggacaacaagcgtgac
tccacgcaggacgaggacagtgacctggatgaggtcagcagtggagagactgagggaggg
gagaagacagacacacacaggtgctcagagacccagaggttactgaacatcgccagagag
ctccttcacactgaggaggcctacgtcaagagactcaacctcctggaccaggtattttgc
actaagctgacagaagctggaatccctcatgacgtgataacagggatcttctccaacatc
tcttccatctactgcttccaccacaagttcctgctccctgagctcaagacacgcatcacc
ggagaatgggactcaaacccgcgtataggagacatcctccagaagctggctccctttatg
aagatgtatggagagtacgtgaagaactttgaccgtgctatggacctggtcaacacctgg
agccaacggtcatcacagttcaagagtgtggtccagaatatacaaaagcaggatgtttgt
gggaacctgactctgcagcaccacatgttggagcctgttcagaggatccctcgctatgaa
ctcctgctcaaggactatctgaagaaactacctgacgatgcactggacaggaaggacaca
gagaaggcattggagctcatttccacagcagccaaccattccaatgctgccatcaggaaa
atggagaagatgaacaaactgcttgaggtctatgagagactggggggagaggaggacatt
gtgaacccagccaacgaactcatcaaggagggacacatcaagaagatgtctgccaagaat
gggacggcccaggaccgatacctctacctgtttaataacatggtgctgtactgcgttccc
aagctgaggctgatggggcagaagttcagtgtgagagagaggataaacatcgctgggatg
gaggtcaggaaggaggttcaggagaatgtgaagcagaacctccctctcacgttcgccatc
atcggcaagcagcgctcactagaactgcaggccagcacggcagaggaaaaggaagactgg
atacaggtgatcctggccaccatagagagacacaagcagaacagtgagacctttaacaaa
gccttcaacagctccttctccagggaggaagatcacctgccagactcaccgggtccctgg
agtaccacatccatagactcagacagtgaaagactgcatgaaaggaaaagttccaagaag
aaggagaaggagaagcagacatgtaaaggatgcaacgagagcttcaacttcaccaagcgc
aaacaccactgcaaagcttgtggagcggccatctgtggtaaatgctctaagatgttggag
aacaagacgtgtcgagtgtgtcctgaatgctatgagacgagccaagtccctgaagggcct
gcaggggccccaggagagctgaagaagaaagctacagccgagaagcaggtgtctctgtct
ctattgggggacaactgtctgctgtgtggccagctgcaggtgcaggagaagggcaagagc
tggaccaagacctgggtggctgtcaccaagactgatcctctagtgctctacctgcagacc
agcggacaggactcccgcggggcacgggccatacccctcccggggtttgaggtgaacatg
tcagcgccatcggcaacagagaagtcagagctcaaacacgcgttccggctgagtaactcc
cagcaggctttgctgttcagcgcccaggacgcagaggtccaggacaagtgggtggagctt
ctctctagagccgcccgtggggaaacgcccacagacacgcccgtcagcctgacggagcac
aggaagagccaatag
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