KEGG   Coregonus clupeaformis (lake whitefish): 121545408
Entry
121545408         CDS       T08357                                 
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
cclu04012  ErbB signaling pathway
cclu04068  FoxO signaling pathway
cclu04140  Autophagy - animal
cclu04150  mTOR signaling pathway
cclu04210  Apoptosis
cclu04218  Cellular senescence
cclu04270  Vascular smooth muscle contraction
cclu04370  VEGF signaling pathway
cclu04371  Apelin signaling pathway
cclu04510  Focal adhesion
cclu04519  Cadherin signaling
cclu04540  Gap junction
cclu04625  C-type lectin receptor signaling pathway
cclu04810  Regulation of actin cytoskeleton
cclu04910  Insulin signaling pathway
cclu04912  GnRH signaling pathway
cclu04914  Progesterone-mediated oocyte maturation
cclu04916  Melanogenesis
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121545408
   04012 ErbB signaling pathway
    121545408
   04370 VEGF signaling pathway
    121545408
   04371 Apelin signaling pathway
    121545408
   04068 FoxO signaling pathway
    121545408
   04150 mTOR signaling pathway
    121545408
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    121545408
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121545408
  09143 Cell growth and death
   04210 Apoptosis
    121545408
   04218 Cellular senescence
    121545408
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121545408
   04540 Gap junction
    121545408
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121545408
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    121545408
  09152 Endocrine system
   04910 Insulin signaling pathway
    121545408
   04912 GnRH signaling pathway
    121545408
   04914 Progesterone-mediated oocyte maturation
    121545408
   04916 Melanogenesis
    121545408
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    121545408
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121545408
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cclu01001]
    121545408
Enzymes [BR:cclu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     121545408
Protein kinases [BR:cclu01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   121545408
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 ABC1 Kinase-like zf-RING-like Pkinase_fungal C1_2 SNX17-27-31_F1_FERM
Other DBs
NCBI-GeneID: 121545408
NCBI-ProteinID: XP_041711851
LinkDB
Position
30:complement(32423233..32439270)
AA seq 684 aa
MEHLQGAWKTLSNGFGMKDSVFEGPCLSPTMVQGLPSQRRSSDDSKIPDSKTSSTIRVYL
PNQQRTVVNVRPGMTLHSCLIKALKVRGLQPECCAVFRLYPGQRSKKSRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLFPTPGESGGPSLPPLTSRRMRESLSRLPSSSLHRCSTPHAFNYTAPY
PPTGGALSQRQRSTSTPNVHMVSTTMPVDSSMIELDYLNTSPSSWCRRFWLKRRVGIVRF
SNSFVEATSESPDKEAMRNHEAMRNHDSGGSSPSQSPTGWSHPQSNTPAPDRRERAPSFN
TQEKHKIRPRDKRDSSYYWEIEASEVVLHSRIGSGSFGTVYKGKWHGDVAVKILKVIDPT
PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCDGSSLYKHLHVQETNFQMF
QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKARWTGSHQVE
QPSGSILWMAPEVIRMQDNMPYSFQSDVYSYGVVLHELMTGELPYSQIANRDQIIFMVGR
GYLSPDLSKLYKSCPKAMKRLVADCIKKIKDERPLFPQILSSIELLQHSLPKINRSASEP
SLHRASHTEDINAFTSTYTRLPVF
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggagcacctccagggagcgtggaagaccctgagcaacggctttgggatgaaggactct
gtgtttgagggcccctgcctctccccgaccatggtgcagggcctcccctcccagcgccgc
tcctccgacgacagcaagatccccgactccaagaccagcagcaccatccgcgtctacctc
cccaaccagcagcgcacggtggtgaacgtgaggccaggtatgaccctgcacagctgcctg
atcaaagcgctgaaggtgcggggcctgcaaccggagtgctgtgctgtcttcagactgtac
ccaggacagaggagtaaaaagtcacgtatggattggaataccgactcgacctcactaatt
ggggaagaactgctggtggaagttttagatcatgtccccttgacgacgcacaactttgtt
cggaaaacatttctgaagttggccttctgcgatatatgccagaagttccttttgaacggt
ttccgttgccaaacatgcggctacaaattccatgagcattgcagcaccaaagtgcccacg
atgtgtgtggattggagcaacatcagacagctcctgttgttccctacaccaggtgaaagt
gggggtccatctcttcctcctcttacttctcggcgaatgagagaatcgctgtcccgactc
cccagcagctctctgcaccgctgctccacccctcacgccttcaactacactgccccctac
ccacccacagggggtgctctgtcccagaggcaacgctccacctccacgcccaacgtccac
atggtcagcaccaccatgccagtcgacagcagcatgatcgagctagattatctgaatacc
tcccctagctcctggtgcaggcgcttctggctgaagaggagagtaggtattgttcgcttc
tccaactcttttgttgaagcgacgtcagagagcccagacaaggaggcaatgcgtaatcat
gaagcaatgcgtaatcatgactcaggcgggagttcccccagccagagtcccacaggctgg
tcccatccccagtctaacaccccagcgccagacagacgagagagggctccttcattcaac
actcaggagaaacacaaaatacgtccgagggacaagcgggactccagttactactgggag
atcgaggccagtgaagtggtgctgcactcccgtatcggctcaggctccttcggaacggta
tacaaagggaaatggcacggtgacgtagcggtgaagatcctaaaggtgattgaccccacg
ccagagcagttccaggccttcagaaacgaggtggctgtccttaggaaaacgcgacacgtc
aacatcctgttgttcatgggctacatgacgaaggacaacctggccattgtgacccagtgg
tgtgatggcagcagcctctacaaacaccttcacgtccaggagaccaacttccagatgttc
cagctcatagacatcgccaggcagacagctcagggcatggactatttgcacgccaaaaac
ataatccaccgggacatgaagtcaaacaatatcttcctacatgagggcctgacggtgaag
ataggagactttggtctggccacggtcaaggccaggtggactggttctcaccaggtggag
caaccctcagggtccatactgtggatggctcctgaggttatccgtatgcaggacaacatg
ccctatagtttccagtcagacgtgtactcctacggtgttgtcctccatgagctgatgacg
ggagagctgccatactcacagatagccaacagagaccagatcatcttcatggtgggccgg
gggtacctgtcgccagacctcagtaagctttataagagctgtcctaaagccatgaagagg
ctggtggccgactgcatcaagaagatcaaggacgagaggccactgttcccccagatcctg
tcgtccattgagctgctccagcactccctgcctaagatcaaccgcagtgcctcagaaccc
tccctgcacagagcctcccacaccgaggacattaacgccttcacttccacctataccaga
ctgcctgtattctag

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