Coregonus clupeaformis (lake whitefish): 121545419
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Entry
121545419 CDS
T08357
Symbol
irf10
Name
(RefSeq) interferon regulatory factor 10
KO
K09445
interferon regulatory factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545419 (irf10)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121545419 (irf10)
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GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121545419
NCBI-ProteinID:
XP_041711877
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Position
30:complement(31930211..31940195)
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AA seq
414 aa
AA seq
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MEEPVKKMHLREWLIAQIDSGKYAGLTWENEDKTMFRIPWKHAAKHDYSLNEDAALFKAW
AVYKGKYWEGRDKADPTTWKTRLRCALNKSTDFMEVPERSQLDVSEPYKVYHIQAEPETG
RDSESPQTESPQTSHSSAPLRNTVTHYPQFGCHRESEVRDRRVNSSEGLEGDHVYYWSNT
GTPQRDSSAPLSIVGPTPQISDLRVRVCLFYQGQLVVDVTTSTPDGCFLLQGQVPLGNER
IYGPCTAQQVPFPPPGVIPLPLGIAEAMGRLLPHLERGVLVWVAPDGVFIKRFCQGRVYW
SGPLAQHADRPNKLDRERTCKLLDTPIFLKELQDYIQGAGPKPRYEIDLCFGEEFPDASQ
PKTRKLIIAQVVPLFAVNLLHRCQTVETEGRPRLHTHNTMGEEEEGQPHPLPQR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccggtcaagaaaatgcatttgagagagtggctgatagcgcagatagacagc
ggaaagtatgcaggactcacctgggagaacgaagacaaaacgatgttcaggatcccatgg
aaacatgcggctaaacatgactatagtctgaacgaagatgcagcactattcaaggcgtgg
gcagtgtataaggggaagtattgggaggggagggacaaggcagatcccaccacctggaaa
actcgtctccgctgtgccctcaacaagagcacagacttcatggaggtcccagagcgcagc
cagttagacgtatccgagccctacaaggtctaccacattcaggcagagccagagacaggc
agagactcagaatctcctcagactgagagtcctcagaccagccactccagtgctcccctg
aggaacaccgtcacacactatccacagtttggctgccatagggaatcagaggtcagggat
agaagagtcaactccagcgagggcttggaaggggaccatgtgtactactggtccaacaca
gggactccccagagggacagctctgctcctctctccatagtcggccctacaccacagatc
tctgacttgcgtgtgcgggtgtgtctgttctaccagggccagctggttgtggatgtaacc
accagcaccccagacggctgtttcctcctgcagggacaggtccccctggggaacgagagg
atctatggaccctgcacagcccaacaggtccccttcccccctccaggggtcatccccctg
cccctgggcatcgctgaggccatgggccgcctgctgccccacctggagaggggcgtcctg
gtgtgggtggctccagatggggtgtttatcaagaggttctgccagggcagggtgtactgg
agtggccctctggcccaacacgcagacaggcccaacaaactggacagggagaggacctgc
aagctgctggacacacctatatttctgaaggagctccaggactatatccagggggcggga
cccaaacctcgctatgaaattgacctctgctttggagaggagtttcccgacgccagccaa
ccgaaaaccaggaagctgatcattgcacaggtggtgcccctgtttgctgtcaacctactg
catagatgccagactgtggagacagaggggagaccacgccttcacacacacaacaccatg
ggggaagaggaagagggtcagccacacccactgccccagcggtga
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