Coregonus clupeaformis (lake whitefish): 121545421
Help
Entry
121545421 CDS
T08357
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121545421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121545421
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545421
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121545421
Coactivators
SAGA/TFTC/STAGA complex
121545421
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121545421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
121545421
NCBI-ProteinID:
XP_041711880
LinkDB
All DBs
Position
30:complement(31666721..31679953)
Genome browser
AA seq
971 aa
AA seq
DB search
MAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGSGRGNSSVRVQSAANHIDNSAVGRN
SNVQDSKMGLSQELAKPGTGVQGGVINSRRSQGSTMYAAIGTTAAGSSMTAGHSPSKTGT
VSGVVTVVPDHGVGIRKTVAAGVQTLNGSSVVINSHNSGSVAALGCSAGSTVAAVAVVNN
GPSSVVKGNTNLPSTSSTVIQTPVMHNAVTSPVISSQLSVLNGVPTVTLVRPPMQTPGTV
TSQSGSNNTVLIPSVDVAHPASSGAQINKLELPKTTIQTTSQVAAPSVVGKSLVLQNVRT
SIPSTIAGSPGGIKAIVPQVFSPRLPQPQQNASNIQNIQLPPGMVLVRSESGQLLMIHQQ
TLAQMQAQSQSQSAMTPRAATPTSTPPVQITSVQAPGMPMMARQVTPTTITKQGSPAQTA
VQATTTLQRPPVLQQNTIMLGGVAATPGQAPVQPGSAAVTQRAGTPGTTGTPGTPIVAST
TEILENVKKCKNFLSTLIKLASSGKQSPETTANVKELVKSLLEGKIEAEDFTSQLYRELN
SSPQPYLVPFLKRSLPALRQMTPDSAAFIQQSQLPQASAQPVASSKALTAVVLGGMAAAQ
RSPLNSSSPGAKGTVHQSPVISLAQTPHSKPGLMVPQQQGAMARPQVTLAQSPMVTLQGQ
HHSRIIMGQPQVVKQLQTVPVVKQALAPGAKVTLGPQSMLHVVQKNRQEAGGGIFKDDDD
INDVASMAGVNLSEESARILATNSEMVGAVTRSCKDEAFLYTSSLTQRVHEIGRRLGVTD
LGPEVINYVSHATQQRLQNLLEKVTEVAQQKNITFKEDDKYEQVSDVRAQLKFFEQLDQM
EKQRKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELNQIRQKEANMTALAAIG
PRKKRKMNSPVSGAGAEDSCSGPSPSGVYNSGGSRPQRQRITRVNLRDLLFCLENERETS
RSHLLYKGFLK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttactggatgatgtttttttcaacacagaggtggacgagaaa
gtagttagtgatctagttggatctttggagtctgagctcacgggatcgggtcgtggaaat
tcttcggtcagggtccagtctgcagcaaatcacattgacaactccgctgtaggtcgcaat
tccaatgtccaggacagcaaaatgggactttcacaagagcttgctaaaccagggactggc
gtgcaagggggtgtcattaatagtaggaggtcccagggttcaaccatgtatgcagcgatc
gggacgacggcggcgggctcgagcatgacagccgggcacagtccgagcaagactgggaca
gtcagtggtgtggtaacggtggttcccgatcacggggtagggatcagaaaaactgtggcg
gctggtgtacaaactttaaatggaagtagcgttgtgataaactctcataattcaggaagt
gttgccgctttggggtgctcagcaggcagcacagtggccgccgtcgcggttgtcaacaac
ggaccgagctccgtggtcaaaggaaacacaaacttaccctcaacttccagcactgttatt
caaacacctgttatgcacaatgctgtcacttcacctgtgatatcgtctcagctgtctgtt
ctaaacggtgtgcccactgtcacgctcgtgaggccgcctatgcaaacacccggaacagtc
acctcgcagagcgggagtaataataccgttctgataccatctgtcgacgttgcccaccct
gcaagttcaggagctcaaatcaacaagttggagttgccaaaaacgaccatacaaacgact
tcacaagtcgccgcccccagtgttgtaggaaaaagtctggttttacaaaatgtgaggacc
tccatcccatcgactattgcaggcagtcctggcgggataaaggcgatcgtgccacaggtg
ttctccccgagacttccgcaaccccaacagaatgcttcaaacatccaaaacattcagctc
cctccaggcatggtgctggtgcgcagtgagagtgggcaacttttgatgatccaccagcag
accctggcccagatgcaggcccagtcccagtcccagagcgccatgaccccacgggcagcc
acccccaccagcactccccctgtccagatcacctctgtacaggctccagggatgcccatg
atggcccgtcaagtgacccccaccaccatcactaagcagggctccccggcccagactgct
gtccaggccaccactaccctccagaggcctcctgtactacagcagaacaccattatgctg
ggtggggtggctgccaccccaggtcaggccccagtacagcctggctcggcagcagtcacc
cagagagcagggacccctggaactactgggacaccaggcacccccatagtcgcttctacc
acggagatcctggagaacgtgaagaagtgtaagaacttcctgtccacgctgatcaagctg
gcatctagcgggaagcagtcgcctgagaccacagccaacgtcaaggagttagtcaagagc
ctgctggagggtaagatcgaagcggaggacttcaccagtcagttataccgggagctcaac
tcctctcctcagccatatctcgtgcctttcctcaagaggagtcttcctgcactgcgtcaa
atgaccccagactcggcagccttcatccagcagagccagctgcctcaggctagcgcccag
cctgtcgcctcctccaaggccttgactgctgtggtgctggggggcatggctgccgcacag
agatcccctctcaacagcagcagccctggggccaaagggaccgtgcaccagtctcctgtc
atcagcctggcccagacgcctcatagcaagcctggcctgatggttcctcaacagcagggg
gcaatggcgaggcctcaggtgactctggcccagtcacccatggttacgctccaaggccag
caccacagtcgcatcatcatgggacagccgcaggtggtcaaacagctgcagacagttcct
gtagtgaagcaggctctagcaccaggggccaaggtaacactggggccccagtctatgctc
cacgtagtacagaaaaacaggcaggaggcaggcggaggaatcttcaaggatgatgatgac
ataaatgacgtggcctctatggctggagtcaacctatcagaggagagtgcccgcattctg
gcaaccaactctgagatggtcggcgcggtgacccgctcctgtaaggacgaggccttcctc
tacacctcctcactaacacagagagtacatgagataggcaggaggttaggggtgactgac
ctggggccggaggtgatcaactacgtttcccatgctacacagcagcggctgcagaacctg
ctggagaaagtgacggaggtggcgcagcagaaaaacatcaccttcaaggaggatgataag
tatgaacaggtgagtgacgtgcgagcccagctgaagttctttgagcagctggatcagatg
gagaaacagaggaaggaggagcaggagagagagatcctgatgaaggcagctaagtctcga
tcacggcaagaggacccagagcagcttcggcttaaacagaaggctaaagagatgcagcag
caggagctgaatcagatcaggcagaaggaggccaacatgacggccctggcagccatcggc
cccaggaagaaacggaaaatgaactcccccgtcagcggagccggggctgaggattcttgc
tctggtccctctccgtcaggtgtgtacaatagcggaggctccaggcctcagcgccagcgc
atcaccagggtcaacctcagggacctgctcttctgtctggaaaatgagagagagaccagc
cgctcacacctgctctataaaggcttcctcaaataa
DBGET
integrated database retrieval system
