KEGG   Coregonus clupeaformis (lake whitefish): 121545469
Entry
121545469         CDS       T08357                                 
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
cclu03272  Virion - Hepatitis viruses
cclu04144  Endocytosis
cclu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121545469
   03272 Virion - Hepatitis viruses
    121545469
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121545469
  09143 Cell growth and death
   04217 Necroptosis
    121545469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121545469
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121545469
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    121545469
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121545469
  Exosomal proteins of other body fluids (saliva and urine)
   121545469
  Exosomal proteins of colorectal cancer cells
   121545469
SSDB
Motif
Pfam: Snf7 SYF2 DUF6437 Methyltransf_31 DUF155
Other DBs
NCBI-GeneID: 121545469
NCBI-ProteinID: XP_041711945
LinkDB
Position
30:1790978..1794273
AA seq 224 aa
MSVFGKLFGGGGKGGKGPSAQEAIQKLRETEEMLTKKQDFLEKKIDQELITAKKNGTKNK
RAALQALKRKKRYEKQLTQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKSAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGDEFDEDELLAELDELEQEELDKNLLE
IGGTENVPLPNVPSTSLPSRPAKKKEDEDEDDMEDLQRWAMEAN
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtccgtgtttgggaagctgttcggcggtgggggcaaaggaggtaaagggccgagtgca
caagaggcgattcagaaactccgagagaccgaggaaatgttaacgaagaaacaggatttt
ctagagaaaaagattgaccaggaactcattactgcaaagaaaaacggcactaaaaacaaa
cgagcggccctgcaggccttgaaaaggaagaagcggtatgagaagcagcttacccagatt
gatggcacattgtccaccatcgagttccagagagaggcgctggaaaatgccaacaccaac
actgaagtgctcaagaacatgggctttgctgctaaggcaatgaagtctgcccatgaaaac
atggacatagacaaagtagatgacttgatgcaagacatcactgagcagcaggagctagca
caagagatctcagatgccatctcaaaacctgtaggctttggagatgagtttgatgaggat
gaactcctagcagagttggatgagctggaacaagaggaattggacaaaaacttgctggag
atcggcgggacagaaaatgttcctcttcccaatgtgccttctacttcattaccctcaaga
cctgccaaaaagaaggaggatgaagatgaggatgacatggaggacttacagcgctgggcg
atggaggctaactag

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