Coregonus clupeaformis (lake whitefish): 121545494
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Entry
121545494 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH2 isoform X1
KO
K11969
ariadne-2 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545494
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121545494
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121545494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4
UBA_ARI1
DUF4637
Motif
Other DBs
NCBI-GeneID:
121545494
NCBI-ProteinID:
XP_041711989
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Position
30:3784927..3796406
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AA seq
522 aa
AA seq
DB search
MSVDMNSQASDSNEDDFGVNSEEEEDDDGGDDEDQGDIADYYDGVAGDMEQQGADSFDPE
EYQFTCLTYRESQKVLCEEVNSFAAILKILPAVAKLILVHFHWQVSQILDRYKSNSSQLL
SEAQVQPSSTCRSVPTPQSLQCGVCLQLVRRDALLALPCQHSFCKACWEQHCTVLVKDGM
GVGISCMAQDCSLQIPEDFVLPLLPGEELKDKYRRYLFRDYVESHFQLQLCPGADCPIVI
QVQEPRARRVQCIRCNEVFCFKCRIMYHAPTDCPTIRRWLTKCADDSETANYISAHTKDC
PKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQ
AREALKKYLFYFERWENHNKSLQLEAQTYQRIQEKIQERVMNNLGTWIDWQYMQNAAKLL
AKCRYTLQYTYPYAYYMESGPRKKLNVRCCGRSCCHNAYDFEYQQAQLEAEIENLSWKVE
RADSYERGSEGELSANDRGDLENQMHIAEQRRRTLLKDFHDT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggacatgaacagccaggcctctgacagcaatgaggatgactttggggtcaac
tcggaggaggaggaggatgatgacgggggtgacgatgaggaccagggggacatagcggac
tactacgacggcgtggccggagacatggagcagcagggggccgactcgttcgacccagag
gagtaccagttcacctgcctcacctacagggagagccagaaggtgctctgcgaggaggtc
aacagtttcgccgccatcctgaagattttacctgctgtagccaaactgatccttgtgcat
tttcactggcaagtgtcacaaatactggacagatacaagtccaactcatcacagttgctg
tctgaggcccaggtccagcccagcagcacctgcagatcagttcctacccctcagtccctc
cagtgtggggtgtgtctgcagctggttcggagggacgccctgctcgcgctgccctgccaa
cactccttctgcaaagcatgctgggagcagcattgcactgtactcgtcaaagatgggatg
ggagtgggtatctcctgtatggctcaggattgttccctccaaattcccgaggactttgtt
ctcccgctactgcctggtgaagagctgaaggacaaatatagacgctacctcttcagggac
tatgtggagagccacttccagctgcagctgtgtccaggggcagactgccccatcgtcatc
caagtgcaggagccacgggcccgcagagtacagtgcatccgctgcaatgaggtcttctgt
ttcaaatgccggatcatgtaccacgccccaacagactgcccaaccatccgaaggtggcta
accaaatgtgcagacgattcagagaccgccaactacatcagtgcacacactaaagattgt
cctaagtgtaatatctgcattgagaagaatggaggctgcaatcacatgcaatgctccaag
tgcaaacacgacttctgctggatgtgtctgggggactggaaaacccatggcagtgagtac
tatgagtgcagtcgctacaaggagaacccagacatcgtcaaccagagccagcaggcacag
gccagagaggcccttaagaaatacctcttctactttgaaaggtgggagaaccacaataag
agtctgcagctggaggctcagacctaccagcggatccaggagaagatccaggagcgggtg
atgaacaacctgggcacctggatagactggcagtacatgcagaatgctgccaagctgctg
gccaagtgtcgctacacactgcagtatacttacccctacgcctactacatggagtctggt
cctcgcaaaaaactgaatgttcgttgctgtgggagatcgtgctgtcacaatgcatatgat
tttgagtaccagcaggcccagctggaggcagagattgagaacctgtcctggaaggtggag
cgagcagacagctacgagagagggagtgagggggagctgagcgccaatgacagaggggat
ctggagaatcagatgcacattgctgagcagaggagacgcacgctgctgaaggattttcat
gacacctga
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