Coregonus clupeaformis (lake whitefish): 121545526
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Entry
121545526 CDS
T08357
Name
(RefSeq) polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121545526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545526
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121545526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
121545526
NCBI-ProteinID:
XP_041712046
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All DBs
Position
30:26370237..26385671
Genome browser
AA seq
1633 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSSTEAETAEATTPATATTATAGPTE
GAEQESCDSMEMVAASGENDASVDESSSSASCSTEPQTRLSRSGVSGQVRSEAQAQTRLS
RSRQSSRQRKKAVMMPRVVLTPLKVNGEHVPSGAAGRRREGSRGGPGPTLRARPELASWK
RPQHFKSLRGYHSGPMKRSRGGVEVDFETPGSILVNTNIRALINMRTFSAFPAHSQHQLL
QLLPEVDRQVGPDGLARLSNSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEK
KVEAWKEKFFEEYHGQKSGLTREESLKLTMSDAADAATSVLDSKVALVAAGTPKRRSVGR
RRRDGRMRRRTRADLRRRAQRTLCKTNSPTLQSSKQPEGTLTLDAASSVSVPSPVPEATT
VQGGEVVLQADCRLEAPAQCASLEPVPCPSPVSALPFVTVPEPEPTPCPSPVSTPCPSPV
STPCPSPVSISTSDEPEVTARLLPEEPAPAVASTSSPCSSSSSSSSSSSPSSSPSSNSER
QGGFTAGLDSSSSSSSSSTAAVTADPLDDGASMVTSVTGGTATSSRESSPAASPTPITAQ
ATKEQKRRPDEPQAFSSFPEKRPRMEDRQSFRTTIDGVHTEKPQPTAEEPKVPPIRIQLS
RIKPPWVKGPPTYQICPRIVPPGEGSRRSGTGARTLADIKARAQQARAQREAAAAVAATG
DGPGPGGGRAGAGLQDRSSGRRTREHPGPVEPGGGAGGVEKQGLPAGSHPPGTQLQQSKL
EPSSTPTPNTAASSPSLSTSSNPSLSSSEPPQTPTPSPTTQEERLGELSGDEGTTPTPPP
PPVKGTSNGLSDNAALLEPESVSSHLRGRGEGDDCDRTTAQSGPLAPTSIPDSLPRFGAQ
GVDVIRSLAGTEQARGEHRGAGGGGGVIQHGSHHVGPQENPPILAREGHSQGKKQSEPLE
RARETASLPRLPPSVREDEAGHHSDSTETASDCENESQEEEPHLSMWSHHLPAQRNGNIQ
HLQRLSQQAHGQPVICSPPLQQNQQPVIQAHVSNHHGHSQTVIQPCFPNGLPSQSLIQPG
QKQQQPGCTPHPDQQALAAPHSQAQRGHKTDPMDDYKASSRGSAEEDCRLGLKPSPIHPT
AGSKRLPSSARPVSTVEANNPLVTQLLQGSLQLEKVLPQTHSSSKLEINRLPGGPQPAPQ
SQLIRQQQTRNPGPRFRGPTEAHTGESLVPELSSQNQQNSPAGRGGSPGASRSVGSSPPG
TVPSRMACLLEEASSRATAMQQYLSQQPGGAVPPGAVPVITSLSSSSSSSRRNSQESAVI
RESPERHHNNLTQPRATPDLCPSEVVPSVKINWHPSKPHPPHQKQLSPAPSVKSEVTSRP
SCQALSKTSPSGPMVGGGPGMVVTKKEAVNSMDGYLTGGGGAMEGLLNMEMSLARMAKKE
AQSKAQYSSTSPSSSSSSSSTSSLPFQLYGKLPKQGCGVAAPGFSYTANVSMVDGSGFSR
SIADGVLQLRQRHSASQSATLSIQAFADSAAEEVALKCSCRLKAMIMCQGCGAFCHDDCI
GPSKLCVSCLVVR
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagagaaagaaggaacgcacgtgggctgaggcggctcgcatggtt
ctagagaacttctctgatgcccccatgacgcccaagcagatcctgcacgttatacagacc
aaggggcttaaggaaatgagaagtggcacagcccctctggcctgtctggtgaccatgctg
cactcccaggtgaggggggacagagtgaaaaacagcatcttctttaagcttcctggcagg
atgagtctgtttaccttgaagaagaacgctctgcagtggaccaagagttcgacagaggcg
gagacagccgaagccaccacaccggctaccgctaccacggcaacagcagggccaacggaa
ggtgcggagcaagagagctgtgactccatggaaatggttgcggccagtggagagaacgat
gcgtccgtagatgagagctcgtccagtgcctcctgctccacagagccccagaccaggctg
agtagatctggagtctctggacaggtgcgctccgaggcccaggcacagacccgactaagt
cgatccagacagtcgagcagacagaggaagaaggctgtgatgatgccgcgtgtggtcctc
actccactcaaggtcaatggtgaacacgtcccatcaggagcagcggggaggcgcagggaa
ggctctagggggggtccaggccccacgctccgtgcccgccccgagctggctagctggaaa
cgcccccagcacttcaagagcttgcgtggctaccactcagggcccatgaagaggagccga
ggcggggtggaggtggactttgagacgcccggctccatcctggtcaacaccaacatcagg
gctctcatcaacatgcgcaccttctctgccttcccagcccactcccaacatcaactcctg
cagctcctccccgaggtcgaccgccaggtgggacctgacggtctggctcgcctcagtaac
tctgctctcaacaatgaattcttcactcacgcctcccagagctggaaggaaaggcttgct
gagggggagttcacccatgagatgcaggtgcgatttcgccaggagatggagaaagagaag
aaagtggaggcatggaaggagaagttctttgaggagtaccacggacaaaagtctggcctg
acccgggaagagtctctgaagttgacgatgagcgacgcggccgatgctgccaccagcgtc
ctggacagcaaggtggccttggtggcggcgggaacgcccaagcgccgcagcgtgggcagg
cggcggcgagacggcaggatgagacggcgaacgcgggcagacttgagacgcagggcgcaa
cgcaccctctgtaagaccaactcccccaccctgcagtcctccaagcagccggagggcaca
ctcactttagacgcagcttcttctgtctctgtcccctcgcccgtcccagaggccaccacg
gtgcagggaggagaggtggtgttgcaggccgactgtagactggaggccccggcccagtgt
gcctccctagagcccgtgccctgcccttcccctgtgtctgcgctcccatttgtgaccgtg
cctgagcctgagcccaccccatgtcccagccctgtatccaccccatgtcccagccctgta
tccaccccatgtcccagccctgtatccatcagcaccagcgatgagcctgaagtcaccgcc
cgcctgctccccgaagagcctgcacctgccgtcgcctccacctcctctccctgctcctca
tcttcctcctcctcctcgtcctcctccccttcctcctctccctcctccaactccgagaga
cagggggggttcaccgccggcttggactcttcctcctcgtcctcttcttcctccacggcc
gctgtcaccgctgatccgctggacgatggggcttccatggtcacctcggtcacggggggc
acggccaccagcagccgggagagcagccctgcagccagccccacccccatcactgcccaa
gccaccaaggagcagaagaggaggccagacgagccccaggccttctccagcttccccgaa
aagaggccgcgaatggaagatcgtcagtcctttcgtaccacaatcgacggggttcacacg
gaaaagccgcagccgacagcagaggagcccaaggtcccacctatccggattcaactctcc
agaatcaaaccgccctgggtcaaagggccgccaacctaccagatctgtccccgcattgtg
ccccccggcgagggctcgcggcgctctgggacgggggcgcgcaccctggcggacatcaaa
gcccgcgcccagcaggcccgggcccagcgcgaggccgctgctgctgttgcagccactggg
gacggaccagggccgggcgggggcagggctggtgctgggctacaggatcgcagcagtgga
agacgaacacgagagcacccaggacccgtcgagcccggaggaggagcaggaggcgtggag
aagcagggattgcctgcgggctctcatccacctggaacacaactacagcagtccaaatta
gagccctcctctacccccaccccgaacacagctgcctcgtccccctccctgtccacctcc
tccaacccctccctgtcctcctccgagcccccgcaaacccccactccatccccaaccacc
caggaggagcgactgggggagctgagtggggacgaggggactacaccaacaccaccacca
ccaccagtcaaaggcacctccaatggactctcagacaatgcagcactgctggagcctgag
tctgtgtccagccacctcagagggcgaggcgaaggggacgactgtgataggacaacggcc
caaagtggtcccctggcgcccacctccatcccagattctctgcccaggttcggggcccag
ggagtagacgtgatcaggtccctggctggcaccgagcaggccaggggggagcacaggggg
gcagggggaggagggggcgtcatccagcatggttcccaccacgtagggccacaagagaac
ccccccatcctggccagagagggccacagccagggcaaaaagcagtcggagcccctggag
agggcgagagaaacagcctccctccctcgtctcccaccttcagtcagagaggacgaggca
gggcatcacagtgactccacggagacggcctctgactgcgagaacgagagccaggaggag
gagccccacctgagcatgtggagccaccacctgcccgctcagcgcaacggcaacatccag
cacctccaaaggttgtctcagcaggcccatggccagcctgtgatctgcagcccccctcta
cagcaaaaccagcagccagtcatccaggctcacgtgtccaaccaccacggccacagccaa
acggtcatccagccctgcttccccaacggtctgcccagccagagtctcatacagccaggc
caaaagcagcagcagcctggatgcactccccacccagaccaacaggctctcgctgcgcca
cattcccaagcccagagggggcacaaaacagacccaatggatgactacaaagcgtccagc
cggggctcggctgaggaggactgtaggctggggctgaagccctctcccatccaccccacc
gctggctccaagaggctccctagttcggcccggcccgtgtccacagtggaggccaacaat
cctctggtcacccagctgctccaaggcagcctccagctggagaaagtcctgccgcagacg
cactcgtctagcaagctagagatcaaccgcctgccaggggggccccagccagccccccag
tcccagctcatccggcaacaacagaccaggaacccgggccctcgcttcaggggccccaca
gaggcccatacgggggagtccctggtccccgagttgtcctctcagaaccaacagaattcc
cctgcaggccgaggaggctcccctggagcaagccggagcgtcgggtcctctcccccaggc
acagtgccctcccgcatggcctgcctgctggaggaggcctcctctcgggccacggccatg
caacagtacctgtcccagcagccaggaggcgctgtgccccccggggccgtgcccgtcatc
acatctctctcttcttcgtcctcttcctccagacggaactcccaagagtcagccgtcatc
cgagagtctccggagaggcaccacaacaacctcactcagccccgggccaccccggacctc
tgcccatctgaggtggtcccctctgtcaagataaactggcacccttccaaaccccacccc
ccgcaccaaaagcagctctcgcccgcacccagcgtgaagagcgaggtcacctcccggccc
tcttgtcaagctctttccaaaacctccccctctggccccatggtaggtggcgggccaggt
atggtggtcaccaaaaaggaggcagtgaactctatggatggttacctgactggaggaggt
ggggctatggagggactgctgaacatggagatgtccttagcccgcatggctaagaaggag
gcgcagagcaaagctcagtactcctccacctccccctcctcttcatcctcctcctcctca
acctcctccctccctttccagctctacggtaagctgcccaagcagggctgcggtgtggcg
gcgcccggcttcagctacacggccaacgtgtcgatggtggacggcagcggcttctcgagg
agcatcgctgacggcgtcctgcagctgcgtcagcgccacagtgccagccagagcgccacg
ctcagcatccaggcgttcgcagacagcgccgctgaggaggtggccctcaagtgctcctgc
cgcctcaaggccatgatcatgtgccagggctgcggggccttctgccacgacgactgcatc
ggcccctccaaactctgtgtatcctgcctggtggtcagatag
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integrated database retrieval system
