Coregonus clupeaformis (lake whitefish): 121545533
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Entry
121545533 CDS
T08357
Name
(RefSeq) semaphorin-3F-like isoform X1
KO
K06840
semaphorin 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
PSI
ig
Ig_2
I-set
PCSK9_C1
Motif
Other DBs
NCBI-GeneID:
121545533
NCBI-ProteinID:
XP_041712063
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Position
30:26546988..26597237
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AA seq
782 aa
AA seq
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METTQALLFFLLSLCVYSCHADARTAPRVHLSYKELMETRTARPFSFSFNTSDYRILHMD
QDQGRLYLGSREYLVALDMHNINKEPLIIHWPATTQRKGECRMTGKGGQGECANFVRLIE
PWNRTHLYTCGTGAYKPICTFINRGWRAEVRTHTHTHTHTHTHTYLPPCIVLSVQEYLFR
LVPGNGDSGKGKCSYDPRQENAAALINGNLYAGVHVDFMGTDLAIFRTLGDRPAVRTEQY
DSRWLNEPVFVKIQQIPDSSESNDDKLYFFFREKSLDGAGGASPSVLARVGRVCLNDDGG
QRSLVNKWTTFLKARLVCSVIGSDGVETYFDELKDVFIQPTQDERNPVVYAVFSTAGSVF
KGSAVCVYSMSDIRNVFNGPFSHKHGHNYQWTPYTGKIPYPRPGTCPGGTFTPGLRSTKE
FSDEAVNFVRAHPLMYHSVYPIHKRPLVVRTGVDYRFTSIVVDLVDAVDGRYEVLFLGTD
CGTVQKVIVLPKDTSTTEELTLEEVEVFRTPAPIKTMKISSKRQQLYVSSEMGLTQVSLH
RCGVYGKACSDCCLARDPYCAWDGETCSAFSPSTKRRSRRQDIKHGDPLRQCRGFNAKVE
KRLSETVQFGVEGSSTFLECQPRSPQATVKWLYQKPDGRRKVLSRDREVLKTGHGILLKS
LSHADGGLYNCLATENNFKHTVARVALRILDREIVEALTSPDGPPEDQNPHHHCHPHHHP
PPPSPPPHNLPPQFSSQPEIRLINQYCQSYWQKLNPNLATKRTSRRHADSQPEPAPGAPS
TS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacccaagccctcctcttctttctcctgagtttatgtgtctacagttgccat
gccgacgctcggactgctcccagagtgcatttgtcttacaaagagctgatggagacgcgg
acagcacggcccttctccttctccttcaacaccagtgactaccgcatcctgcacatggac
caggaccagggccgtctctacctgggcagccgggagtacctggtggccctggacatgcac
aacatcaacaaggagcccctcataattcactggccggccactacccagaggaaaggagag
tgtagaatgactggaaagggtgggcagggggagtgtgcaaactttgtgcgtctgatcgaa
ccctggaatcgcacacacctgtacacctgtggcacaggggcctataagcctatctgcacc
ttcatcaacagaggatggagagcagaggtacggacacacacacacacacacacacacaca
cacacacacacatacctacctccatgtattgtcctctctgtgcaggagtacctgttcagg
ctggtccctggcaacggggactcagggaaagggaaatgctcctatgaccctcgacaggag
aacgctgcagcccttatcaatgggaatctgtatgcaggggtccacgttgacttcatgggc
acggacctggccatctttagaacactgggggacagacctgctgtcaggacggagcaatat
gactcccgctggttgaatgagccagtgtttgttaaaatccagcagattcctgacagctcc
gagagtaatgatgacaagctctacttcttcttccgggagaagagcctggacggtgccggg
ggggccagccccagtgtcctggccagggtgggccgagtatgcctgaatgatgatgggggt
cagaggtcactggtcaacaagtggacgaccttcctgaaagctcggctggtgtgctcagtg
atagggagtgatggtgtagagacctatttcgacgagctgaaggatgtcttcattcagcca
acacaagacgagcgcaatcctgtcgtgtacgccgtcttttccactgcgggttctgtgttt
aagggctcagccgtgtgtgtgtactctatgtccgacatccgcaatgtcttcaatggccct
ttctcacacaagcacggacacaattaccagtggaccccctacactggaaagatcccctac
cctcgccctggaacgtgtccaggaggaacgttcaccccgggcctccgctccaccaaggag
ttttcagatgaggcggtgaactttgtgagggcgcaccccctcatgtaccactctgtctac
cccatacacaagcggcccctggtggtccgaacgggggtggactaccgcttcacctccatc
gtggtggacctggtggatgctgtggacgggaggtatgaggtgctcttcctgggcactgat
tgtggaacagtccaaaaggtgatagtacttcctaaagacactagcacaacagaagagctc
acgttagaggaagtggaggtgttcaggactccagctcctattaagactatgaagatttca
tcaaaaaggcaacagctgtatgtgtcgtcagagatggggcttacccaggtgtccctgcac
aggtgtggcgtctatgggaaggcctgttcagactgctgcctggccagagacccttactgt
gcctgggacggggagacctgctccgccttcagcccctccaccaagaggcggagcagaaga
caggatattaagcatggagaccccttgcggcagtgcagagggttcaatgcaaaagttgag
aagcgtctcagtgaaacagtgcagtttggggtggaggggagtagcacgttcctggagtgc
caacccagatctccacaagcgacagtcaaatggctctaccagaaaccagacggcaggagg
aaagtgctgagcagagacagagaggtgctgaagactggtcacggcatcctgctcaagtct
ctgagccacgccgacggggggctgtacaactgcctggccaccgagaacaacttcaagcac
acggtggcccgcgtggccctccgcatcctggaccgggagattgtagaggccctcacctcc
ccggacggccccccggaggaccagaacccgcatcaccactgccacccccaccaccaccct
ccgcctccatcacctccgcctcacaacctgccgccgcagttctcctcccagccggagatc
cgcctcatcaaccagtactgtcagtcttactggcagaagctcaaccctaacctggccacc
aaacgcaccagcaggaggcacgctgatagccagccagagccagccccgggggcccctagc
acctcctag
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