Coregonus clupeaformis (lake whitefish): 121545553
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Entry
121545553 CDS
T08357
Name
(RefSeq) lysosomal amino acid transporter 1 homolog
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121545553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121545553
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
121545553
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Gene cluster
GFIT
Motif
Pfam:
PQ-loop
PAP2_3
MtN3_slv
DUF3165
Motif
Other DBs
NCBI-GeneID:
121545553
NCBI-ProteinID:
XP_041712095
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Position
30:complement(27048756..27052404)
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AA seq
314 aa
AA seq
DB search
MSRNLGSADGVLTLVSFGLNTDGNFSSVCPNGSIWVWEGLGECAQDARDMASVILGLLSI
VCFMVSSLPQYYSSCKSGNMDSALSIWFLLLWLGGDSCNLVGSFLADQLPLQTYTAVYYV
LADLLMLGMYFYYVAKNRMNNTRSVLNVVGVVYILGFSAGLVALPASGSQQDVVLSGFKR
RALLSTTVDGVKAFSTKEIIGFIIGSISSVLYLCSRLPQMHINYTRKSTEGVSYFLFALV
ILGNTTYGLSVLLKNPEQGQGEGSYIIHHLPWLVGSLGTLSLDLLISIQFLIYRNNAPLE
LESQHDERAALLDK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaatttggggtcggctgatggtgtcctcacgctggtgtcctttggattgaac
actgatggaaacttcagctctgtgtgcccgaatggatcaatatgggtttgggaagggctg
ggggaatgtgcccaggacgccagggacatggccagtgtcatcctgggtctgttgtcaata
gtgtgcttcatggtctcttccctaccgcaatactacagctcttgtaagagtgggaatatg
gacagtgccttgtccatttggtttctgctgctgtggctggggggcgactcctgcaatctt
gtaggctcattcttagctgaccaactgccgctacagacgtacacagcagtgtattacgtc
ctggctgacttattgatgctgggaatgtacttttactatgtggctaagaacaggatgaat
aacaccaggtcagtcttaaatgtggtcggtgtggtctacatcctgggcttctctgcaggc
cttgtggccttacctgcgtcagggtcccaacaggatgtggtcctctctgggtttaagagg
cgggccttgctgtcaaccactgtggatggtgttaaggctttcagcaccaaggagatcatt
gggtttatcattgggtccatatcctcagtgctctacctctgctccagactgccacagatg
cacattaattatacgagaaagtcgacggagggtgtgtcctacttcctgtttgccctggtc
atcctgggtaacaccacatacggcctgagtgtgctgctgaagaaccctgagcagggccag
ggagagggaagctacatcatccaccacctgccttggcttgtaggcagcctgggcaccctc
tctctagacctcctgatctccatacagttcttgatataccgcaataacgcccctctagag
ttggaatcgcagcacgatgaacgagctgctctgctggacaaatga
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