Coregonus clupeaformis (lake whitefish): 121545610
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Entry
121545610 CDS
T08357
Name
(RefSeq) UHRF1-binding protein 1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121545610
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121545610
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
121545610
NCBI-ProteinID:
XP_041712214
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All DBs
Position
30:complement(30874606..30920632)
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AA seq
1346 aa
AA seq
DB search
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRAPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQSRAFHASFELWQLQGNSLNPKWQKTDLRYTRITDPKRGEVLTF
KEINWQSLRIEADAIESEDQDLNSTPLRLITNQGRIRIALKRRLKDCNVLASKLLFILDD
LLWVLTDSQLKAVIHYAKSLSEAMEKSAQQRKSMAAKSLQTAPPSPGIHALWTDPPPSPS
GGVPSTLDQYFDQHDVKESSYHTFISRLDLHICNDSSSADPDEPPPPGSQGAMQLTFRKL
GFDYYPIHRPGDGCRHWERHCGAMEARAQWAGILLQEFQRRVEVSGIPVPHSEVPNQAKD
FPAKRAQDGQPTPTASPPEREQISKRNSIAPPHPGNPFKRLRSSCVVVRMDDLDIHQVST
GGRHSKTQSLLSCNRKALNLADSIPAIHLQFTEYYFPDNPGLPVPNTNLYAQLNGLQLCL
DPASLLWVNLFSRGLLHTLEQVKAFYHLQDSGKAEEHMDMHMDAAQIKLIIPLESSIMDH
QDRPQSLSITVPQTVLSNTRHFPHGARTDLHTTYSSFSTCHFFQSTPPCSFPRDQSFFLP
LPSAFLQHSLEMEPLPLSERRPLRAKDVWFLSLSSLSMSFEGARKSNRGRAHPFVEPFTI
SVWMCRPSEFKGSSLVSSPSEPAPVDPDHKTPEQQENHLPPNLEHNQDSQQEAPVASIHF
LAQAITPVKVWLNHYQYVALLRMKETLARLGDELGRDTRDAKQARGQEADRPTVCLALLM
DSVELGLLLPPAATEPEEEEAHTPGSESPSLTDSDLSPTHQATLPGPLEDSGIGNATATV
NSSPPLEQEVDGVVEEASEAVEGMEGEMAQGDGNGPVLSPPFSPEHHPSLLSRDPSTFSL
EGELSTALTATKDVTKDAFSASLDLTKGAFSITKDAFSFMSRGSGMSKLFNPQAKEQRPE
EGSPMASLRLQSMNHSFSQHSFDSAILDGSLPNDHLSVESDTSENFVILMDESGVESMMR
PNGTQEPSGGSPALGTEGGSLADLSSSLSQSIEDITQDTTSVLLLVLSGMACVTDLKGED
LVVAVEAQDLTLRQMGNVKVSDLLAGLVPAPGGSTVGQRQGCRAAPVVGMRMEMGPSAAR
HGSLSALVGHLELGVRGCRVELLVSTLATLGPFLEDELSGDVQPIKIRLENVTITLKDDG
PKIYPTAPQPQPATFTVDQVVVERSDDGILRIKGGEGPVPRDSVGGAVNTFLESQLTEAQ
AALSQALTDRERLLLEVRKYHPMFDL
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataatcaaaaagcaaatattgaaacatttgtccaggttcaccaagaacctg
tccccagacaagatcaacctgagcacgctgaagggcgagggccagctgtccaacctggag
ctggatgaagaggtgctgcagaacatgctggacctgcccacctggttggcggtcacccgg
gtctactgcaacaaggctgcaatcaggatacaatggacaaagttgaagaccagccctatc
tgcctgttcctggacaaggtagaggtggagatgagaacgtgtgaggagccccgcgcccca
aatggtccctcccctattgccatcactgctggccagagtgagtatggctttgctgagaag
gtggtggagggtatgtcagtcatcatcaactccatcaccatcaaagtgcagtcccgtgcc
ttccatgcttccttcgagctctggcagctccagggtaacagtctcaaccccaaatggcag
aaaactgacctccgctacacccgcatcacagaccccaagagaggagaggtgttgacgttt
aaggagatcaactggcagagtctgcgtatcgaggccgatgccatagagagtgaggaccag
gacctgaacagtaccccactacgcctcatcaccaaccaaggacgcatccgcatcgccctg
aagcgcaggttgaaggactgtaatgtgctggcctctaagctgctcttcatcctggacgac
ctgctgtgggtgctgacggactctcagctcaaagctgtcatccactacgccaagtccctg
agtgaggccatggagaagtctgcccaacagaggaagagcatggccgcaaagtccctacag
actgcacccccgtcccctggtatccacgctctatggacagaccctccaccctctcccagt
ggtggtgtccccagtaccctggaccagtactttgatcaacacgacgtcaaagagtcctcc
taccacaccttcatctctcgtctggacctgcacatatgcaacgacagttcctcagcagac
cccgatgagcctcctcctccaggctcccagggtgcaatgcagctgaccttccgcaagctt
ggttttgactactaccccatccacaggcctggtgatggctgtcggcattgggagcgtcac
tgtggggcgatggaggcccgggcccagtgggctggcatactactgcaggagttccagagg
agggtggaagtgtcagggatccctgtgccacactctgaggtccccaaccaggccaaggac
ttccccgccaagagggcccaggatggacagcccacccccacggctagcccgcctgaaagg
gagcaaatctccaagaggaactcaatagcacctcctcacccagggaacccttttaagagg
ctccgctccagctgtgtggtggtacgaatggatgacctggatatccatcaggtgtctaca
gggggacgccacagcaagacccagtcgttactatcctgtaaccgcaaggccctcaaccta
gcagacagtataccagccatccacctgcaattcacagagtattacttccctgacaacccc
ggtttgcctgtacccaatacgaacctgtatgcccaactgaacggcctacagctgtgcctg
gacccagccagtctgctgtgggtcaacctgttctctaggggcctgctgcataccctggag
caggtcaaagccttctaccacctccaggacagtggcaaggcagaggagcacatggacatg
cacatggacgcagctcagatcaagctgatcattcccctggagtcgtccatcatggaccac
caggaccggccccagtccctgagcatcaccgtccctcagacggtcctcagcaacacccgc
cacttcccccacggcgcccggaccgacctccacaccacctacagcagcttctccacctgc
cacttcttccagtcaactcccccctgctccttcccccgagaccagagcttcttcctcccc
ctaccctctgccttcctccagcactccctggagatggagcccctgcccctgtctgagagg
aggcccctcagggccaaggatgtctggttcctcagcctgtccagtctgtccatgagcttc
gagggggcgcggaaaagcaacaggggcagagctcaccccttcgtggagcctttcacaatt
tctgtgtggatgtgtcgtccgtctgagtttaagggcagttccctggtctcctcccccagt
gaaccagctcctgttgatcccgatcataaaaccccagagcagcaggagaaccacctcccg
cccaacctggaacacaaccaggacagtcaacaggaggctccagtggcttctatccatttc
ctggcccaggccatcacacctgtcaaggtgtggctcaaccactaccagtatgttgccctg
ttgcggatgaaggaaaccctggccaggctgggggatgagctgggccgggacaccagggac
gctaagcaagccaggggccaggaggctgaccgccctacggtgtgcctagccctcctaatg
gactcagtggagctggggctcctgctaccacctgcagccactgaaccagaggaggaggag
gcccacaccccagggtctgaaagccccagcctgacagactccgacctctcccccactcac
caggctacattgccaggccctctggaggatagtgggataggaaacgccactgccaccgtc
aacagctctcctccccttgagcaggaggtggatggtgtggtagaggaggccagcgaggca
gtagagggcatggagggggagatggcccagggggatggcaatggtcctgttctctctcct
cccttctcccctgaacaccatccctctctcctgtccagggacccctctaccttcagcctg
gagggagagctgtccactgccctcaccgccaccaaggacgtcaccaaagatgcctttagc
gcctccctggacctgactaaaggggcgttctccatcacaaaagatgccttcagcttcatg
agtcgcgggtcggggatgagcaagctgttcaatccacaggcaaaggagcagcgccctgag
gaggggtcccccatggccagcctgcggctccagtccatgaaccactctttctcacagcac
tcatttgacagcgctatcctggacggcagcctgcccaacgaccacctctcagtggaaagc
gacaccagcgagaactttgtcatcctcatggatgagtcaggagtagagtccatgatgcga
cccaacggcacccaggagcccagtggaggcagccctgccctgggtacagagggggggtcc
ttagctgacctgagcagctccctgtcccagagcattgaggacatcacacaggacacaacc
tctgtgttgttgctggtgctcagtgggatggcctgtgtgacggacctgaagggagaggac
ctggtggtggcagtggaggcccaagacctcaccctcagacagatgggcaacgtcaaggtc
tctgacctgctggccggactggtgccagctcctggtgggtctaccgtgggccagaggcaa
ggctgcagggcagctcccgtggtgggcatgcggatggagatgggtccttctgcagcgcgg
catggttccctgtctgcgttggtgggtcacctggagctgggagtgcgaggctgtcgggtg
gagctgttggtctctaccctggccaccctggggccattcctggaggatgagctcagtggc
gatgtccaacccattaagatccggctggaaaacgtcaccatcactctgaaggatgatggt
cccaagatctaccccacggccccccagccccaacctgccacctttaccgtggaccaggtg
gttgtagagcgatctgatgacggcattttgagaatcaaaggtggtgaaggcccagtccca
agagactctgtaggtggtgctgtgaatacgttcctggagtcccagctaacggaggctcag
gcagccctctctcaagccctcactgaccgagagcgtctcctcctggaggttaggaagtac
caccccatgtttgacctgtga
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