Coregonus clupeaformis (lake whitefish): 121545617
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Entry
121545617 CDS
T08357
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121545617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121545617
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121545617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
121545617
NCBI-ProteinID:
XP_041712229
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All DBs
Position
30:30870672..30874369
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AA seq
199 aa
AA seq
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MADPARIKTESNSEQSLAAGESPKTEDTEEVPVTSADTESKDTSSQSIIHENKQDSVAED
EGTACHPASKKLKVEPEKKKDRRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKA
AIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDMPPLQPKHMREAVR
RLKSREQIPNIKHNNILFH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccggctcggataaagactgaatccaactctgagcaatcattggctgctgga
gaaagccctaaaaccgaagacactgaagaagtgcccgtgacctctgcagacactgaatca
aaagatacatcctcacaatcaatcatacacgaaaacaaacaggactctgtggctgaggat
gagggaaccgcatgtcatcctgcttccaaaaagctgaaagtggagcctgagaagaaaaag
gacaggcgccaaaaggttgacgaggatgagatacagaagatgcaggttttagtctcctcc
ttttccgaggagcagcttaaccgctatgagatgtacagacgctcggccttccccaaagct
gctatcaagaggctgatacagtccatcacaggatcctcagtctctcaaaatgtggttatc
gccatgtccggtatttccaaggtctttgctggagaaatagtggaagaagctctggacgtg
tgtgagaagtggggggacatgcctcccctgcagcccaagcacatgagggaggctgtcagg
aggctgaagagcagagagcagatccccaatataaagcacaataacattctcttccactga
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