Coregonus clupeaformis (lake whitefish): 121545665
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Entry
121545665 CDS
T08357
Name
(RefSeq) PDZ domain-containing protein 4-like isoform X1
KO
K24056
PDZ domain-containing protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121545665
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
121545665
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121545665
NCBI-ProteinID:
XP_045065414
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All DBs
Position
30:complement(20995184..21017662)
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AA seq
923 aa
AA seq
DB search
MGCNMCVVQKPEEQYRVMFQKGQISNMLCPFDGEGRFKVNGKELSCLSGDPTLDVRDPLL
SHVLKRGARRRAGLAGRLAGLDGTVAVTGGLTDCVDSGTQTDISFQHMLTLGRTAHHPGG
APPPHPPPSPPLPPILEPYLLNELLLEPEYYEPNDYFDITQHEVDLRQDELEYEEVELYK
SRQQDKLGLTVCYRTDDEEDLGIYVGEVNPNSIAAMDGRIREGDRILQINGVDIQNREEA
VAILTQEDSTNISLLLARPEIENDNQLDPDELDLEVLDNAVHLPSPHQLRNRASVLGEGP
GVVGGGVVVGHGRGHRDSPNLLHTLLSNSQELDSGVGRTDESTRNEESSEHDLLGDDQTS
APTTNATNTPGSMRRFLSVRGDRDTPPLLHGHSTEFHFSTDSLLGLDCLGGGGGGDLAGE
GVYAADPVMMMMPGLTEEECERYRELLEIKCYYEKNGNALLLLGEHGGDGGVPLDVNRNE
SLMQHEMALLEEELRHLEFKCRNILRAQKMQQLRERCLKAWPLEEESGAGGGAGAGRVAP
LVSEESCHHELSDINELPERERSDKDSTSAYNTGGESCRSTPLVSEQYPSPSAQGHSSLE
GGDSASLQSRTPSWHRERVGRSERGQANLNQPYSPNSHRRGAEAKTSSPRGTKFRSLSRD
GGARRVSDGGVRCPKTNGTVEGREGRSAENSPYLSRRHSGSRIPQRYQSCMQLRSPSTSE
GLERPRDGSESPMSLGSTCKDIPQGPVSMPSLPISPPLPLPASPRMEWKVKVRSDGSRYV
AKRPVRDRLLKARAIKIREERSGMTTDDDAVSEMKMGRYWSKEERKQQLLRAREQRRRRE
FMMQSRLDCLRERDRESSGGGQQGAPHGQEPTTILELSHRRSQKKRSRRILDNWITIQEL
LAHGTRSPDGKKVYNPLLSVTTV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaacatgtgtgtggttcagaagcctgaggaacagtacagggtcatgttccag
aagggtcaaataagtaacatgctgtgtccttttgatggagaaggtcgatttaaggtgaat
ggtaaggagctgtcctgtctctcaggggaccccaccctggatgtgcgagaccccctgctg
tctcacgtgttgaagaggggggcccggcgacgggcgggactggcagggcgactagcgggg
ctagacgggacagtagcagttacaggggggctgactgactgtgtggacagtggcactcag
actgacatcagcttccaacacatgttgactctgggaaggaccgcccaccacccaggtgga
gccccgccccctcacccgcccccctcccctccgctgccacccatcctggaaccctacctg
ctcaacgagctccttttagagcctgaatattatgaacccaatgactactttgacatcact
cagcatgaggtggatctcaggcaggatgagttggagtacgaggaggtagagctgtataag
tctcgtcagcaggacaagctagggttaacggtgtgctaccggacagacgatgaggaggac
ctggggatctatgtgggcgaggtcaaccccaatagtatagctgctatggatggccgcatc
cgagagggggatagaatcttacagataaacggggtggacatccagaacagagaagaggcg
gtggccattctgacccaggaggacagcaccaacatctccctgctcctggcccggcccgaa
atagagaatgacaaccagctcgacccagatgaactggacctggaggttttggataacgcc
gtccatctgcccagcccccatcagctgaggaacagggcctccgtgctgggtgaagggcca
ggggtcgtgggtggtggtgtggtggttggccacgggcggggtcaccgtgactctccaaac
ctgctccacacgttgctgagtaacagtcaggagctggacagcggggtaggccgtacagac
gagagtacccgcaatgaggagtcctcagaacacgacctactaggagacgaccagaccagc
gctcccaccaccaacgccaccaacacccccggcagcatgcgcaggttcctctctgtccgg
ggggacagggacactccaccccttctacatggccattccacagagttccacttcagcact
gactctttactgggtctggactgtctgggtgggggaggaggaggtgacctggcaggagag
ggggtctacgcagctgacccagtgatgatgatgatgccgggcctgacagaagaagagtgt
gagaggtacagggagctcctggagatcaagtgttactatgagaagaacggcaatgctctt
ctgctgctgggggagcatgggggcgatgggggggttcctctggatgtgaacaggaacgaa
agcctgatgcagcatgagatggccctcctggaagaggagttacgccacctggagttcaag
tgtcgtaacatcctgagggcccagaagatgcagcagctccgggagcgctgtctgaaggca
tggcccctggaggaggaaagtggggctggaggtggggccggggctgggcgggtggctcct
ttggtcagcgaggagtcctgtcaccatgaactgtcagacattaatgagctgcctgagagg
gagcgctcagacaaggacagcaccagcgcctacaacacaggaggggagagctgcaggagc
acccctctggtcagcgaacagtatccttccccctctgcacagggccacagcagcttggag
gggggagactctgcctctttgcagtctcggacccccagctggcacagggagagggtaggc
aggagtgagagggggcaggctaacctgaaccaaccctactcccctaactcacacaggagg
ggagcggaagccaagacctccagcccgagagggaccaagttcagatccctatcccgcgac
gggggggcaaggagggtgtcagacggaggggtgaggtgccccaaaaccaatgggacagtg
gaggggagggaaggacgtagcgctgagaacagcccttatctttcccgccgccactctggc
tccagaatcccccagcgctaccagagctgcatgcagctgaggtccccctccacatctgag
ggcctggagagacccagggatggcagcgagagtcccatgagcctggggagcacatgcaag
gacatcccccagggccctgtatccatgccctccttacccatctcccctcccctccctctg
ccggcctcgccacgtatggagtggaaggtcaaagtacgcagcgacggctcccgctatgtt
gccaagcggcctgttagggaccgcctcctgaaggcccgggccattaagatccgggaggag
cgcagtggcatgaccacggacgacgatgccgtcagcgagatgaagatgggccgctattgg
tccaaggaggaaaggaagcagcagcttctgagggccagggaacagcgcagacgcagggag
tttatgatgcagagcaggctggactgcctgagggagagggatagggagtcgagtggcggt
ggacaacagggggctccgcacggacaggagcctactaccatcctggagctgagccacagg
aggagccagaagaaacggagccgtaggatcctggacaactggatcaccatccaggaacta
ctagcccacggaaccaggtcacctgacggcaagaaggtctacaatcctctgctgtcagtc
accactgtctaa
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