Coregonus clupeaformis (lake whitefish): 121545667
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Entry
121545667 CDS
T08357
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121545667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121545667
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121545667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
SlyX
PH
Cyclase_polyket
Motif
Other DBs
NCBI-GeneID:
121545667
NCBI-ProteinID:
XP_041712350
LinkDB
All DBs
Position
30:20906014..20964060
Genome browser
AA seq
1545 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLMETQRRRIEELEGQLDRVSQENQNLRLEKPTP
PRAPELPEQNHSNTNHRAEQPLSLPIHPGSSSGGSGSTPSPITAPPPAVVVPPAGLSRER
RAHTRLTRGMSCGSNPAEREQRERLDHTDSSDTNSSTIRRNVETETQCAAPPRAHSDGPY
SQTTAYLRGTERYSDSSRGPGPPGPRGPPCVAPPSSASLAWALRTRNQPASLALRKQEEE
ENKRCKASLSDSYELSTDLQDKKVEMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERL
RSSASESRMTRRIILSNMRLQYSFDDRQPQQQGAGTQTNFTHSVGIGPPHSPDTERTGDY
THLEDSFTKQVKSLADSMDTALTCRGGRDDSQEGSREDFGECVWSSSSNPSSQRGLCERA
RGGGGGLSMHGDSTATSYSDVTLYMDDCMPSSPLSLDRAPSSTDTEYWGPGGGVGGREDS
RDTEGGGSSNSRRSTPCTECRDYRLRGAHLPLLTIEPPSDSSVDMSDRSERGSLSRQIYE
QEPAGGAGSPQGTLKHSPNTPCPVSTYPDTPSSSSSPQQPPTTPLSSSSSAALPPGGLEQ
PCLSDGDNDSLNSTTNSNETVNCSSGSSSQDSLREPLPPLGKQTYQRESRHSWDSPPFNN
DVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGN
RQKQFNKDVLDCVVDEMDFSGMDLDDALRKFQAQIRVQGEAQKVERLIEAFSQRYCVCNP
TLIRQFQNPDTIFILAFAIILLNTDMYSPNVKAERKMKIEDFIKNLRGVDNGQDIPRDLL
VGIYQRIQKWELRTNDDHVSQVQAVERVIVGKKPVMSLPHRRLVCCCQLYEVPDPNRPQR
TGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQSFPLVEMQVHMFQNSYYPHGIRLTSA
VLGGERKVLIVFMAPSQQDRTRFVSDLRESIAEVQEMEKYRVESELEKQKGVMRTGLLTG
LVGGGVGVKGEVANGTLGRPSLDDNYSAGEGLKRSALSSSLRDLSDGGKRGRSNSVGSLD
STMEGSIISSPRPHQRYPVPGVVPGCYPTEDYRPHRPILSPGTGVGGGPGQQHTAAGTGV
GGIPSSVERAGVGSGPGGGNTGSFLGSLFGSKRAKPPSPLIPPGPPYPAPVPPPTTGGPP
PHSPSSLCQSEGGPSKIQALHAQYCHTAAVQPPPPYYHHHRYHVQAGPPPLPGGGVPPHI
LQRGPFPCRPPIGPPHAQLQQLAHLSQLSQHGMQGRYGNMAVGCPPPLSPHSQHSQNPQF
TLYHTPPTHSIRAGAMPGKPPLTLSHSHPHPHAHSHTHPGHPLSATPHPAPHPHQSRFIF
GTLPHQHQHQQPSASVNTHHAASAAQYQPQYPPLSSIPPPPPLPFTPPFYPPYPPYASLP
SPPPAPRAASAGAPSDGGWGDWHRGQLQIQTYQPDQHGGVSSRTWGHRGQRSEGRMEEGG
GARARDRARAGRGEQDSSSSNNSASDKKKRNLFRLCYFHLRFPHM
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagtccggagagccccaaccgggccgtggagtacctcctggagctcaacaac
atcatcgagagccaggccaagctcatggagacccagcggcggcgcatcgaggagctggag
ggtcagctggaccgagtcagccaggagaatcagaacctgaggctggagaaacccactcct
ccacgagccccggagctccccgaacagaaccatagcaacaccaaccacagagcagagcag
ccactctccttgcccatccaccctggcagcagtagtggaggtagtggcagcacccccagc
cccatcaccgccccaccccctgcagtggtggtaccccctgcagggctgagccgagagaga
cgtgcccacaccaggctgacccggggcatgtcctgtggctcgaacccagctgagagggag
cagcgggagagattggaccacacagacagctctgacaccaacagctccaccatccgcaga
aatgtggaaacagagacccagtgtgcggcgcctcccagggcccactcagacggcccctac
agccagaccacagcgtacctgcgtggcacagagcgctacagtgacagcagccgtggtcct
ggtcctccaggccctcgggggcctccgtgtgtggcccctcccagctcggctagccttgcc
tgggcactgcgaacacgcaatcagcctgccagcctggccctccgcaagcaggaggaagag
gagaacaagaggtgcaaggccagtctctctgacagctatgagctctccacagacctacag
gacaagaaggtggagatgttggagaggaagtatggtggctccttcgtgagccgcagagca
gcccggaccatccagacagccttccgccagtaccgcatgaacaagaactttgagcgcctc
cgcagttcggcgtccgagagccgcatgacgcgacgcatcatcctgtccaacatgcggctg
cagtactcgtttgacgaccgccagccgcagcagcagggggccggaacacagacgaacttc
acacacagcgtgggcatcggccctcctcattcacctgacacagaaaggacaggagactac
acacacctggaggactccttcaccaaacaggtgaagtccctggctgactccatggacact
gccctgacctgccgtggcgggcgggatgactcccaggagggcagcagggaggactttggg
gagtgtgtgtggagcagcagcagtaacccctcctctcagagaggcctgtgtgagagagcc
agaggagggggagggggcctcagcatgcatggagacagcacagccacctcctacagcgat
gtcactctatacatggacgactgcatgccctcctcacccctctccctggaccgggccccc
agcagcacagacaccgagtactggggccctgggggaggcgtggggggccgtgaggacagc
agggacactgagggagggggtagtagtaatagccgtcgcagcactccctgcactgagtgt
cgagactatcgtctgaggggcgcccacctgcccctgctcaccatcgagccccccagcgac
agctctgtggacatgagcgaccgctcggagcgtggctccctcagcagacagatctatgag
caggagccagcgggaggagcaggctctcctcagggaacactcaaacactcacctaacact
ccctgccctgtctccacatacccagacaccccctcgtcctcctcctccccccaacagccc
cccaccacccccctgtcctcctcctcctctgctgcgctgcctcctggtggcctagagcag
ccctgtctgtctgacggggacaacgactctctcaactccaccaccaactccaacgaaaca
gtcaactgcagctctggctcctcgtctcaggacagcctgagggagcccctaccccctctg
ggcaagcagacctaccagagagagagtagacacagctgggactcaccgccattcaacaac
gacgtggtgcaaagacgccagtaccgcatcggactcaacctattcaacaagaagccagaa
aaagggatccagtacctgatcgagagaggctttgtgtccgacactccggtcgggattgct
cgcttcatcctggagaggaagggcctgagcagacagatgatcggagaattcctcggcaac
cggcagaaacagttcaacaaggacgtactggactgtgtggtggacgagatggacttctca
gggatggacctggacgatgctctgaggaagttccaggctcagattagagttcaaggagaa
gcccagaaagtagagaggctcatagaggctttcagtcagcggtactgtgtgtgtaacccg
acgctgatccgccagttccagaacccagacaccattttcatcctggctttcgccatcatc
ctcctcaacacggatatgtacagccccaacgtcaaggcggagaggaagatgaagatagag
gacttcatcaagaacctcagaggagtggacaatggccaagacattcccagggacctgttg
gttgggatctaccagcggatccagaagtgggagctaaggaccaacgatgaccacgtgtcc
caagtgcaggcagtggagagagtcatagtaggcaaaaagcctgtgatgtctctgccacac
cgtaggctggtatgctgctgtcagctctatgaggtgcctgaccccaaccgacctcagaga
acaggagttcaccaacgggaggtcttcctgttcaacgacctgctggtggtgactaagatt
ttccagaagaagaagacttctgtgacgtacagtttcagacagtccttccctctggtggag
atgcaagtccacatgttccagaactcctactacccccacggtattcgtctgacctcggca
gtgttgggtggagagaggaaggtccttatcgtgttcatggcacccagtcagcaggaccgc
acccgctttgtcagtgaccttagagagagtatcgctgaggtgcaggagatggagaagtac
agagtggagtctgagttggagaagcagaaaggcgtgatgcggactggcctgctaaccggc
ttggtcggaggtggagtgggtgtgaagggtgaggtggcgaacggcaccctgggaaggccc
agtctagatgacaactactctgcaggagagggactcaaacgctccgcgctcagctcatct
ctccgagacctatcagatggagggaaacgtggtcgcagtaacagtgttggctccctcgac
agtaccatggaaggttccatcattagcagcccccggccacaccagcgttacccggttccg
ggcgtggtcccaggctgctaccctacagaagactaccggccgcatcgccccatcctgagc
cccggaacgggggtggggggtgggccggggcaacaacacaccgctgctgggacgggagtt
ggggggattcccagcagtgtagagagagcgggggtggggagcggccctggggggggcaat
acgggctccttcctaggctctctattcggcagcaaacgtgccaaaccgccaagtcccctt
ataccaccggggccaccctaccccgcccctgtccccccacccactacgggagggccccct
cctcactccccttcatctctgtgccagtcggaggggggcccttccaagatccaggccctg
catgcgcagtactgccacacggccgccgtgcagccccctcccccctactaccatcaccat
cgctaccacgtccaagctggccctcctcccttgccaggcgggggcgtgccccctcatatt
cttcagagagggccgttcccctgtcgccctcctattggcccccctcacgcccagctccag
cagctggcccatctctcccagctttcccagcatggcatgcagggtcgctacggcaacatg
gcggtgggctgtcctccccccctttctcctcactcccaacattcccagaacccccagttc
accctgtaccacacgccgcccacacactctatcagggcgggcgccatgccaggcaaacct
cctctgactttgtctcactcccacccgcacccccacgcacactcccacacccacccaggg
cacccgctcagtgctacgccgcaccccgccccccacccacatcagtctcgcttcatcttt
ggcacgctaccccaccaacatcagcatcagcagccgtccgcctccgtcaacacccatcac
gctgcgtccgccgcccagtatcagccccagtaccctcctctctcttctatcccccccccc
cccccactcccctttaccccccccttctaccccccttatcccccttatgcctctctgccc
tcaccccctccagcaccccgggcagcctcagcaggggccccaagtgacgggggctggggc
gactggcacagggggcagctccaaatccaaacctatcaaccggatcagcacggtggtgtg
agcagcagaacgtggggccacagagggcagaggtcagagggcaggatggaggaagggggc
ggggctagggccagggatagagccagggctggtagaggtgagcaggacagcagcagcagt
aacaacagcgccagtgacaagaagaaacgcaacttatttcgactctgctactttcacctt
cgcttcccacacatgtag
DBGET
integrated database retrieval system
