KEGG   Coregonus clupeaformis (lake whitefish): 121545695
Entry
121545695         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121545695
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121545695
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121545695
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121545695
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121545695
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2
Other DBs
NCBI-GeneID: 121545695
NCBI-ProteinID: XP_041712383
LinkDB
Position
30:19957320..19988404
AA seq 1547 aa
MTQPRPDEFKPPQECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPRDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERLLYPYNLFQSGANFLAPELA
SKLMRLVSAPELDKLVQKPTLPVDTSDKECKPPDLAERQQFVEPTESCFNSACRAKRMRA
EVDALVEQSLTHLSEELLLKPSGCVKTEPGTEPCENNRPNLRRRMGSFVAKPEPEKEIPI
LVKQEPIEPVSEADKNKSRYKKKPSLDAPPPAVSVVDLYMCLVCGSGRDEDRLLLCDGCD
ASYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLQAFGEMADSFKS
DYFNMPVHMVPTELVEKEFWRLVSAIEEDVTVEYGADIASKEFGSGFPIRNGRFKVSEKD
EKYLKCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYL
HWGEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSYGVPIYRT
NQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDE
MICKMASKANSLDVVLASAVQKDMKDMIREEQDLRDKVRKMGVLHCEQAEYDLLQDDERQ
CAKCRTTCYLSAITCPCSPGQLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNVVKQR
AESYDEWASRVTETLEAKLDKKKSLSVFCSLINESESKKFPDNDLLRQLRLVTQDAEKCS
SVAQQLLNGKRQTRYRCAGGKTQSQLTVQELRSFVRQLYNIPCSLPQAPQLKDLLNCIED
FQQHSEKVLMDEATGTAVIQSLLDISFDFDVELPELPLLRERLEQARWLEGVQQTRAQPS
TLTLETMRRLIDQGVGLTSHPSVDKAMARLQELLTVSEHWEEKTSIFLKARPPLSIEVLS
EAAEKVAGIPAYLPNCMMLKDSISRAREWLQEAEALQDGDSIPLFDNLSEMVLQGQAIPV
QLDHLKQLESLVAEVQAWKESAAKTFLMKNSHFTLLEVLCPRFEVGAGAGSPKRKSKKAK
DGSKKKMVKLDCLIDVEKALSETKDSTSALATLGEVRLREMWALSSLRAANESKLLPTAD
CMDLNVCVCQNPPMGAMLQCELCRDAFHSVCVRAPSDSRSTQAWLCPDCRRSEKPPLDKV
LPLLASLQRIQVRLPEGDALHYLVERTVSWQHRARQVSASCGLPDLEESFGTTTSPDGKP
PCLTPEWNRTSHDQMVFYTEQRCIPLQGLSVELEELMVEGLLLQVSLPEITQLYHVLLNG
LRTHHTNGRTSQQDDDPSDCDKRKQCNSQGRSSPQKEDGLKKEVVNGAEKKAKRRLEREA
LEAERRDKAKKLQNKRQKMNKEKNLERRAASTSSSPRSDFSQSDGSEEEMAMCPAEGCQQ
PEGDEVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCVSCTISNGR
NT seq 4644 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccgcctcaggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttatataaataagatacgtccaattgctgaa
aaaacgggtatttgcaaggtccgcccgcctcgggactggcagcctccatttgcatgtgat
gttgacagactgcacttcactcctcggatacagaggctaaatgaactggaggcacagacc
agagtcaagcttaatttcttggaccagattgcaaagttctgggagttgcaggggtgttct
ctgaagattcctcatgtggaaaggaagatattggacctgtatcaactcaacaagaatgtt
gcagatgagggtggatttgatattgtgtgtcgcgatagacgttggacagcgattgcgctt
aagatgggctttgctcctggcaaggctgttggctctcacttacggtcacactatgagaga
ctcctctacccctacaacctcttccagagcggagccaacttcctggcaccagagcttgcg
tccaagctgatgcgtttagtgtctgctcctgaacttgacaagcttgtccagaagccaacc
ctgccagttgacacgagtgacaaggagtgtaaaccccctgacctggctgagaggcagcaa
tttgttgagccaaccgagtcctgcttcaacagcgcctgcagagcaaagcggatgagagct
gaggtggatgcccttgtcgaacagagcctcacacacttgtcagaagaactcctcttaaaa
ccatcaggttgtgtgaagacagaaccaggaactgaaccctgtgagaacaacagaccaaat
ctgaggaggaggatgggctcttttgttgccaagcccgagccagaaaaagaaattcccatt
ctagtgaaacaagaacccattgagccggtgagcgaggcagacaaaaacaagtctcgatat
aagaaaaaaccaagtcttgatgcaccacctcctgcagtgagtgtagtggacctgtatatg
tgtctggtgtgtggtagcggaagagacgaggatcgtcttctgctgtgtgatggctgtgac
gccagttaccacaccttctgtctcataccccctctacacgatgtccccaaaggagactgg
aggtgccccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggctttgag
caggcatacagggactactctttgcaggcttttggagaaatggcagactccttcaagtct
gattacttcaacatgccagttcatatggttcccacagagttggtggaaaaagagttctgg
cgcttggtgagcgccatcgaagaggacgtcacagtggagtacggagcagatatagcctcc
aaggagtttgggagcggattccccatcaggaatggaagatttaaggtttcagaaaaggat
gagaagtacctgaagtgtggctggaacctgaacaacatggcgatgatggacccgtcagtg
ttgactcatgtcacagcagacatctgtgggatgactctaccttggctttatgtaggcatg
tgcttctcctccttctgctggcacatcgaggaccactggagctactcaatcaactatctg
cactggggggagccgaagacatggtatggagcacctggctttgctgcagaacagcttgag
gctgtgatgaagaagctggctccagagctgtttcagattcagcctgatctcctccaccag
ctggtcaccatcatgaaccccaacaccctcatgtcctatggggtcccgatttacagaaca
aatcagtgtgctggtgagtttgtcatcactttccccagagcctatcacagtggtttcaac
cagggcttcaactttgctgaggctgtcaacttctgcactgtggactggatggcattaggc
cgacagtgcgttgaccactacagactgctgcatcggtactgtgttttctcccatgacgag
atgatctgcaagatggcttccaaggccaacagtttggatgtggtcctggcgtcggctgtc
cagaaggatatgaaggacatgatcagagaggaacaggacctacgagataaagtccgcaag
atgggggtgttgcattgcgagcaggcggaatacgatctcctgcaggacgatgagcggcag
tgtgccaagtgtaggaccacctgttacctgtctgccatcacctgcccctgcagccccggc
cagctggtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacaca
ctgaattatagatttacactggatgatctgtaccccatgatgaacgtggtgaagcagcga
gctgagtcctatgacgagtgggcctcccgcgtgacggagactctggaggctaaactggac
aagaaaaaaagcttgtcagtcttctgctccctcattaacgaatcagagtccaagaagttc
cctgacaatgacctcttgcgtcagctccgtttagtcacacaggatgcagagaagtgctcc
tcagtggcccagcagctactcaacggcaaaaggcagactaggtatcggtgtgctggggga
aagacccagagccagctgaccgtgcaggagctgaggtcatttgtcaggcagctttacaac
atcccctgcagccttcctcaagccccccaattaaaggatctcttgaattgcattgaagac
ttccagcagcacagtgagaaagttctgatggatgaggccaccggcacagcggtcatccag
agtcttctagacattagctttgactttgatgtggagctgcctgaacttccattactacgg
gagaggctggagcaagcccgctggctggagggtgtgcagcagaccagagcccagccctcc
accctcaccctggagaccatgcggaggctgatagaccagggcgtgggcctgacctctcac
ccctccgtggataaggccatggctcgtctgcaggagctgctcacagtgtctgaacattgg
gaggaaaagaccagcatcttcctcaaggccaggccccccctctctatagaagtcctctcg
gaagcagctgagaaggtggcggggatccctgcttacctccccaactgtatgatgctgaag
gactccatcagtagggcaagggagtggcttcaggaagctgaggcacttcaggatggagat
tccattccattgtttgacaacctctctgaaatggttctacaaggacaagccatcccagtc
cagctggaccatctaaagcagctggagtccctggtagcagaggtgcaggcctggaaagag
tctgcagctaaaactttcctcatgaaaaactctcactttactctgcttgaggttctgtgt
ccaagatttgaggttggtgcaggagcagggtctccgaaaaggaagtcgaaaaaagctaaa
gacggcagtaagaagaagatggtgaagctagactgtctcattgacgtggaaaaagccctc
tcagagaccaaggactctacctcagctctggcaactcttggggaggtgcggttacgggag
atgtgggccctctcatccctccgggcagctaacgagtccaagctcctccccacggcagac
tgcatggacctgaatgtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgt
gagctctgccgggacgccttccacagcgtgtgtgtgagggctccctcagactcccgttca
acccaggcctggctgtgtccagactgccgacgctcggaaaagccccccctggacaaggtc
ctgcccttgcttgcgtcactgcagcgtatccaggtgcgtctgccggaaggcgatgcgctt
cactatttggttgagagaacagtcagctggcaacaccgtgcgcgacaggtctctgcctcc
tgtggccttccagacctggaggagagctttggaactacaacatctccggatggaaagcca
ccatgtttgactccagagtggaacaggacaagccatgatcagatggtcttctacaccgag
caaagatgcattcctctgcagggtctgagtgtggagctggaggagctgatggtggaaggg
ctcctgctgcaggtgtctctgccagaaatcacacaactctaccatgtgctactgaacggg
ctgagaacgcaccacaccaacggacgcacgtcacagcaagatgacgacccctcggactgt
gacaaacgcaagcagtgcaactctcagggaagaagctctccacaaaaagaggatgggctg
aaaaaggaagtagttaacggagcagagaagaaggccaagcgacgcctggagagggaggct
ctagaggcagagcgcagggacaaggccaagaagctccagaacaagagacagaaaatgaac
aaggagaagaacctggaacgcagggcggcctcgacctcatcatctccccgctccgacttt
tctcagtcagacggctctgaagaggagatggccatgtgtccagcagagggatgccagcag
ccagaaggagatgaggtggactgggtccagtgtgacggcagctgtaaccagtggttccac
caggtctgtgtgggtgtgacagccgagctggctgagaaagaggactatgtgtgtgtcagc
tgtacaataagcaatggccgctga

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