Coregonus clupeaformis (lake whitefish): 121545698
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Entry
121545698 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121545698
04082 Neuroactive ligand signaling
121545698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121545698
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121545698
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121545698
NCBI-ProteinID:
XP_041712394
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Position
3:complement(2508156..2525779)
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AA seq
441 aa
AA seq
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MALLIQILVTLTCVGSVYGQESYAGENITRILDRLLDGYDNWLRPGSGGMITEVKTDIFV
TSFGPVSDVEMEYTIDMFFRQTWVDERLKYDGAVEILRLNNKMVDKIWTPDTFFRNSRNS
IAHNMTTPNKLFRIMQNGTILYTMRLTISAECPMRLMDFPMDGHTCPLRFGSYAYTSSEI
TFTWRKGLEASVDCPQESISLLQYDLVGQKLSTETFKSNTGDYSVMVVHFLLQRKLGYYL
IQTYIPLIMVVVLSQVAFWINKESVPARTVASITTVLTMTTLSISARQSLPKVAYATAMD
WFIAVCFAFVASALIEFAAVNYFATLEANRLKKNARQKKLEVLAEARYDEEEDESASSPL
SERGGLKKRYNSIAQSETDTGPPVPIFLQQGSAVPPIPALAGTSPIDQYSRIMFPLAFAL
FNLFYWIIYLGKDTMEQARED
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttgattcagattttggtcactttgacctgtgttggcagtgtctatggacaa
gaaagttacgcaggtgaaaacatcacccgtattctggaccgactactagatggatatgac
aactggttgcgaccaggatccggaggtatgattacagaggtgaaaacagatatttttgtc
accagctttggaccagtatcagatgtggaaatggagtacaccatagacatgttcttccgc
cagacctgggtggacgagaggctgaagtacgacggcgccgtggagatcctgcgtctcaac
aacaagatggtggataagatctggacgcccgacacgttcttcaggaactccaggaactcc
atcgcccacaacatgaccactcccaacaagctgttccgcatcatgcagaacgggaccatc
ctctacaccatgagactaaccatcagtgcagagtgtcccatgaggctcatggacttccct
atggacggacatacctgtcctctcaggttcggcagctatgcgtacacgagcagtgagatc
acctttacctggaggaagggcctggaagcttccgtagactgtcctcaggagtctatcagt
ctgctacagtatgacctggtgggacagaagttatccacagagacgttcaagtccaacaca
ggtgactactctgtcatggtagtccattttcttctacagaggaagctaggctactacctg
attcagacgtacatccctctgattatggtggtggtgctgtcacaagtagccttctggatc
aacaaagagtctgtccctgcacgcactgtggctagcatcaccacggtcctcaccatgaca
accctcagcatcagcgcccgccagtctctgcccaaggtggcctacgctacagccatggac
tggttcatcgccgtgtgtttcgccttcgtggcgtccgcgctcatcgagttcgccgccgtc
aactactttgctacgctggaggccaacagactgaagaagaacgccaggcagaagaaactg
gaggtcctggctgaagcaagatatgatgaggaggaggatgagagtgcttcatctcccctg
tcagagcgtgggggcctgaagaagaggtataactccatagcccagagtgagacggacact
ggccctccagtgcccatcttcctgcagcagggttcagctgtgccccccatcccagcgctg
gctggcactagccccatagaccagtactcccgcatcatgttccccctggccttcgcactc
ttcaacctgttctactggatcatatacctgggcaaggacactatggaacaggccagagag
gattga
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