Coregonus clupeaformis (lake whitefish): 121545715
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Entry
121545715 CDS
T08357
Name
(RefSeq) growth/differentiation factor 9-like
KO
K22673
growth differentiation factor 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121545715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121545715
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121545715
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
121545715
NCBI-ProteinID:
XP_041712414
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Position
3:2587714..2592550
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AA seq
445 aa
AA seq
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METPLHLTIVLNYWTSILLLLLIGGLSLGSSPTTSNLADEFGDSTSYQHGSILSPLLKAL
TAQGVPWRDTTLITRPEPRYVRYMKRLYRVSSRHERSSEGNNHLYNTVRLITPRDECLEQ
GNEFFMQDLSYNLDRVRAKEQLLKSVLLYSFDQEQATSMTTLCYLDVKEQDTQDQCPLCP
STHHSVNFLFHTDRRRKWVEVDITAFLQPLIQSHKKDIHLLINLTCVEGRGRGAKGGGEE
RSGRGPVELHLRSPSLLLYLNDTSELAHQRWPPTRSRGHPRSANEMDTFESLVEFKPERR
ISRSERRRLRRESLDLSTNNAGGKTSTKTVLPDLLPSSDFPTSDCALYDFRVSFSELKLS
HWIIFPHRYNPRYCKGTCPRAVGFIYGSPRHTFFQNMIYHKLDSSVPRPSCVPSEYNPLS
VLTLEADSIAYKELDEMIATRCTCR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagactcccctccacttgactattgtgcttaattactggacctctattttactactc
ctcttgatcggcggcctttcacttggatcgtccccgaccacgtcaaatctagctgacgag
ttcggtgattccacttcgtaccaacatggcagtatcttgtcgccccttctgaaggcgctg
acagcacagggagttccatggcgagacacgaccctaataacgagacccgagccgagatat
gttcgatacatgaaaagactgtacagggtgtcttctagacacgagaggagttcggaaggg
aacaaccatctgtacaacacagttcgactgataaccccgcgggatgagtgcctggaacaa
ggcaacgagttcttcatgcaagacctctcctacaatctggaccgtgtcagagccaaggag
cagctcctgaagtctgtcctgctgtactctttcgatcaagagcaggccacgtccatgact
accctgtgttacctagatgtgaaagagcaggatacccaggatcagtgtcctctctgcccc
agtacccatcactcagtcaacttcctgttccacacggaccgcaggaggaagtgggttgag
gtggacatcacggcgttcctccaacctctcatccagtcccacaagaaagacatccacctg
ctcatcaacctgacctgtgtggagggaagaggcagaggggctaagggtggaggagaggag
cggagtggtaggggccccgtggagctccacctaaggtctccgtccttgctcctgtacctc
aatgacaccagcgagctggcacaccaaagatggccgcccactaggtcacgaggtcatccg
aggtcagccaatgagatggacacctttgagagcctggtggagttcaaaccggagcgaagg
atcagccggagcgagaggaggagactgaggagagaatctctagatctgtcaacgaacaac
gcaggaggcaaaacgagcacgaagaccgtcctccctgacctcctcccgagttctgacttc
cctacaagcgactgtgccttgtatgacttcagagtgagcttcagtgagctcaaactgagc
cattggatcattttcccccacaggtacaaccccaggtactgtaaaggcacctgtcccagg
gctgtggggttcatctacggctcccccagacacactttcttccagaacatgatctaccac
aaactggactcctctgtaccacggccttcctgtgttccctcggagtacaaccccctgagt
gtcttaacccttgaagcggactccatcgcctacaaggagttagatgaaatgatcgccacg
aggtgcacatgccgctga
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