Coregonus clupeaformis (lake whitefish): 121545731
Help
Entry
121545731 CDS
T08357
Name
(RefSeq) POU domain, class 6, transcription factor 1-like isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545731
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121545731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
121545731
NCBI-ProteinID:
XP_041712440
LinkDB
All DBs
Position
30:complement(19238340..19247220)
Genome browser
AA seq
652 aa
AA seq
DB search
MDPQDLPAADTPLTVNEQPLGSCTLKFPTKNNQVIVMSGHETIRVLEVEVDQASLPSSVP
DGRTGLGGEDVSNQAMQPEAGTQDSPPAPHNTGGVGEPFVGYRYVLGEQVVAVDSEASAV
QNLAQTAVPISVSLSQPQATMPITVQSLQGCQQVLTQDGLATLMTGMMAQTGSLGQPLLI
PLSMAGSMGGQGLAVLTFPTSNVATLPGLSAASQSGGLLKLPFAGLQGLQTATVLNPVQA
QQTVFQSQTASLQQVQAAMQQAQQNTQVTAAQLARAMPAVSQPSVSVATLHSAGLSINPA
INNMFWMPPFQSSQISAASLGAQPQFISSLTSTPIITSAMSGITSQIITNAQGQVIGTIP
LMLNPASLTGGAATQALNLQGFQGLQVQTVQPQLVLNNQGQIIATIGNGPATVPTSAAVI
PKPNVPVTFSKPSTQAQVTTVTQSPVVIAPQPSAMKTVTPISSSVPITCGETPTVGQLVS
KPQQGCTDEEGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEK
LDITPKSAQKLKPVLERWLAEAELWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIEVLN
TYFEKNALPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKINVFQVQP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcaggatctccctgctgctgacacacccctcactgtcaatgaacagccatta
ggttcctgcactttgaaattccctaccaaaaacaaccaggtgatagtgatgtctggtcat
gagaccatccgtgtcttggaagtggaggtagatcaagcctctcttccatcctcagtgcct
gatgggaggactggtttggggggtgaggatgtgagtaatcaggctatgcaacctgaggca
ggaacacaggacagcccgccagcaccccacaacactgggggagtaggtgagccctttgta
ggataccgatacgtgctgggggagcaggtggtggctgtggattctgaagcctctgctgtc
cagaatcttgctcagactgcagttcccatcagtgtatccctgtcgcagccacaggccacc
atgcccatcactgtgcagagcttgcagggctgtcaacaggtcctgacccaggatggtctg
gccactctgatgacagggatgatggcccagacaggctccctgggccagcccctgctcatc
cccctcagcatggcagggtccatggggggccaaggcctggctgtcctcaccttccccacc
agcaacgtagccacactccctggcctttcagctgccagccagtccggaggcctcctcaaa
ctaccctttgccggcttacaaggcttgcaaacagccactgtgctaaaccctgtccaggcc
cagcagacggttttccagtctcagacagcatcactacagcaggtccaggcagctatgcag
caggctcagcagaacacgcaggtgaccgcagcccaactggcccgggccatgccagccgtc
tctcagcccagtgtgtctgtggcaacactccattctgcaggcctctccatcaaccctgcc
attaacaatatgttctggatgcctccgtttcaatcctctcagatcagtgctgcatctcta
ggggctcagcctcagttcatcagctcccttacatccactcccatcatcaccagtgccatg
tctggaatcaccagccagatcatcaccaacgcacagggacaggtgattggaaccatcccc
ctgatgctgaaccctgcctcactgacaggaggggctgctactcaggctctgaatctccag
ggctttcaaggcctgcaggtccagacagtccagccacagctggttctgaacaaccagggc
cagatcattgccaccatagggaatggacctgctacagtccccacttctgctgcggttatt
cccaagcctaatgttcctgtgacattctccaagcccagcacccaggctcaggtaacaact
gttacgcagtcacctgtggtcatcgccccacaaccgtctgcaatgaagacagtcacgcca
atctcctcctcagtccctatcacctgtggggagacacccactgtgggccagctcgtcagc
aagccacagcaagggtgcacagatgaggagggcattaatctggaagagattcgagagttt
gccaagaacttcaagatccgccggctgtccctggggctgacgcagacacaagtgggacag
gccctcacggctacagagggaccggcctacagccagtctgccatctgcaggtttgagaag
ctggacattacacccaagagtgctcagaagctgaagcctgtgctggagcggtggctggct
gaagcagagctgtggaaccagaagggtcagcagaatttgatggagtttgtgggtggtgag
ccgtccaagaaacgcaagcgtcgcaccagcttcaccccgcaggccatcgaagtgctcaac
acctactttgagaagaatgccctgccaacgggccaggagattacggaaatcgctaaggag
ctcaactacgaccgtgaggttgtgcgtgtatggttctgcaacaggcggcagacactgaaa
aacaccagcaagatcaatgtgtttcaagtgcagccgtaa
DBGET
integrated database retrieval system
