Coregonus clupeaformis (lake whitefish): 121545754
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Entry
121545754 CDS
T08357
Name
(RefSeq) mitochondrial ubiquitin ligase activator of NFKB 1
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121545754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545754
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121545754
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121545754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-RING_2
COX4
LapA_dom
DUF4381
Motif
Other DBs
NCBI-GeneID:
121545754
NCBI-ProteinID:
XP_041712483
LinkDB
All DBs
Position
30:complement(17463797..17480759)
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AA seq
352 aa
AA seq
DB search
MDSSGKPSTAQFLLLATSSALTAVFYSVYRRRTTTVARLKGAKKVSIDQDMKNILTELPG
KCVPYAVIEGVVRSVKETLNSQFVDNCKGVIERLTLKEKKMVWNRTTHLWNESEKVIHQR
TNTVPFDLVSHDEAVTATIRVIRPLESSELDLETTYENFHPTAQSLTNVIGHFISGERPK
GIHETEEMLRLGESVTGVGELVLDNNLVKLQPPKQDLRYFLSRLDFDSLVEKQQSSVRFW
RVLTMVFGVVASTTLLFILWKHWAYHRQRRKEKNVLEEFKEQQRERMRELNVEEASVSPS
ACTVCLSRERSCVFLECGHVCACDRCYQALPEPKKCPICRATIERVVPLYNS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggattctagtgggaaaccctccacagcccaattcctgctattagccaccagctcagca
ctgactgcagtcttctactctgtgtacaggaggaggacaacaacagtagcaagattaaag
ggagccaagaaagtgtctattgatcaggatatgaagaacatcctgacagaattaccagga
aaatgtgtcccgtatgctgtgattgaaggtgttgtgagatctgtgaaagaaaccttgaac
agccagtttgtggacaactgcaaaggggtcatcgagaggttaactctaaaggagaagaag
atggtgtggaatcgcaccactcatctctggaacgagagtgaaaaggtcatccaccagcgc
acgaacacggtgccctttgacctggtgtcccacgacgaggctgtgacagccaccatccgg
gtcatccgtcccctggaatcctcggagctggacctggagaccacctatgagaactttcac
cccaccgcccagtccctgaccaacgtcatcggccacttcatcagcggggagcgccctaaa
gggatccatgagacggaggagatgttgcgtctaggggagagtgtgaccggggtcggggag
ctggtgctggacaacaacctggtgaagctccagcctcccaagcaggacctgaggtacttc
ctcagccgactggactttgattccctggtggagaagcagcagagcagcgtcaggttctgg
agggtcctgaccatggtgtttggtgtggttgcttccacaacgctcctcttcatcctgtgg
aagcattgggcttaccatagacagaggaggaaggagaagaacgtcctggaggagttcaag
gagcagcagagggagaggatgagggagctgaatgtagaagaggccagtgtttcccctagt
gcctgtacagtgtgtctgagccgggagcgctcctgtgtgttcctggagtgtgggcatgtc
tgtgcctgtgaccggtgctaccaggctctgccagagccaaagaagtgccctatctgcagg
gcgacgatagagagggtagtgcctctttataacagctaa
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