Coregonus clupeaformis (lake whitefish): 121545780
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Entry
121545780 CDS
T08357
Name
(RefSeq) sal-like protein 4
KO
K19871
sal-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545780
03036 Chromosome and associated proteins [BR:
cclu03036
]
121545780
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121545780
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121545780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2HC_2
zf-C2H2_6
NinF
B129_C2H2-zf
DUF2225
Motif
Other DBs
NCBI-GeneID:
121545780
NCBI-ProteinID:
XP_041712539
LinkDB
All DBs
Position
30:complement(16213360..16223819)
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AA seq
1116 aa
AA seq
DB search
MSRRKQAKPQQINSDEPGSSENGVLQDGQTEEDGNEVKRFRMDETKVCNKCCAELIDEAD
FFKHQNNCTKSNEMVIMKDGEGREVPEEFSQGGSPGDFQSDYSDCQSCSNTLSKSNAVSM
ERMEEEPKSNSEEQPSKQDQVEMSDSPRPEMSCHQHQASAKPQDSNVTLESMPCTKVAVT
QHSSNSGSNNRKSPQATQEALQAIPMILEQLVALQQQQLQQIQLTEQIRIQVAMMAPQSL
HSALGAAVDPLKALGVHLSQQLSAAAALIGKRTSNQSLSLESLKQGKLPPSNCIPTSLAQ
GLGPMPSKAEILKGLPDLANHLPALLPHSPGSMAFQSPFTGLSSGMDPSKKVKSKIPNMP
ESKNGSGGDSMYKHKCKYCWKTFGNDSALQIHLRSHTGERPFKCNICGNRFTTKGNLKVH
FQRHKEKYPYIRMNPHPVPEHLDNIPTSSGIPYGMSMPIEESNMVDMKPMLCLPSPGFHP
SALQGFKPSFDGFRSDPFSQRASSGSDCASISSNMFNHEMGSDQDHHVSKELLGALHHMN
GNCLPGDHNSSETAKLQQMVDGLEKRTNDPNECYICHRVLSCQSSLKMHYRTHTGERPYK
CKICGRAFSTNGNLKAHYGVHRANTPLKMQHSCPICQKKFTNAVVLQQHIRMHMGGQIPN
TPMPETQFEAFEEIDSSLPDEKSMDTNGFACMEDQDTELDSQEKPSNTSDSLAPSSSEEL
HQPNQAPPSSMFSSIAAQEIHMKNLPSALNLQRQSGTAAECDGVPPKESPSASECIREQE
YQNGRSPAISDSVSFHSSSPVNSHVGSSQSKSPESAIPEDYTQNGPRTDSDSSSQDANGA
LDLTAPSFTPKTIKEEPGLLFTNGEYAPSHLPPFMRVPPSLVKLERQIPPEISMGMGPLF
VSQMPQGAGGQPQDGSSAHRRSSKQHLCNSCGKNFSSASALQIHERTHTGEKPFGCTICG
RAFTTKGNLKVHVGTHMWNSSARRGQRLSLDNPMALMAMSSESGNMMPDMMPPPKELGPP
PPMNFDQSLWNQYTAAFTNGLSMKTNEISVIQNGGMPMPGSLAGGPMVRSTGGLMKMDCS
HSGLPATMAEMERNGSECVARSQFQHFMEEGKIAVN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgcaagcaagctaagccacagcaaatcaattccgatgagcccggttcgtca
gaaaatggggttctacaagacggtcaaactgaagaggatgggaatgaggtgaagaggttt
agaatggatgagacgaaggtctgcaacaaatgctgtgctgaactcatcgatgaggctgac
tttttcaaacatcagaataattgcactaaaagtaatgagatggtcatcatgaaagatgga
gaggggagagaagtaccagaagagttctcacaaggaggctcccccggtgacttccagagt
gactacagtgactgccagtcctgcagtaatactctatcaaagtccaatgcagtgtctatg
gaaaggatggaggaagaaccaaaatcaaacagtgaggaacaaccatccaaacaagaccag
gtggagatgtctgacagtcccaggcctgagatgagttgccatcagcaccaagcctcagcc
aaaccccaagattcaaacgtcaccttggagtcaatgccttgcaccaaagtggccgtcact
cagcattcatcaaacagtgggtcgaacaaccgcaagtctccacaggccacccaggaggcc
ttgcaggccatccccatgatcctggaacagctggtggccctccagcagcagcagctccag
cagatccaactgactgagcagatacgtatccaggtggcaatgatggctccacagagcctc
cactcggccctaggggcagcagtcgaccccctcaaagccctaggagttcatctctcccag
cagctctctgctgcagcagccctgatcggcaagaggactagcaaccagagcctctcacta
gagtcactcaaacagggtaaactacctccgtccaactgcattcccacctcactggctcaa
ggcctgggtccgatgccctccaaagccgagatattgaaggggctcccagacctggccaac
cacctaccagcgttactgcctcactcaccaggctccatggccttccaaagtcccttcact
ggcctctcatcagggatggatccctctaagaaagtaaagagcaagatcccaaatatgccg
gagtctaaaaacgggtctggtggcgacagcatgtacaagcacaagtgtaagtactgttgg
aaaactttcgggaacgacagcgcactccagatccatttgcgctcacacactggagaaaga
ccgtttaaatgtaacatatgtggaaaccgcttcacaaccaaaggaaacctcaaagtgcat
ttccagagacacaaggagaagtacccttacatcaggatgaacccacacccggtgccagaa
caccttgacaacattcccaccagcagcggcatcccctacggcatgtcaatgcccattgaa
gaatccaacatggtggacatgaagccaatgctctgcctcccatctccaggtttccaccca
tcagcactgcaggggttcaagccttcatttgatggtttcaggagtgacccattctcccaa
agagcgtcatcaggaagtgactgcgcatcaatttcctcaaacatgttcaatcacgaaatg
ggctctgatcaggaccaccatgtatctaaagagctattgggagcgctgcatcacatgaat
ggcaattgccttcctggcgaccacaacagctctgaaactgccaaactacagcagatggtg
gatgggctggaaaagaggaccaatgacccaaacgagtgctacatctgccaccgggtgctc
agctgccagagctccttgaagatgcattaccgtacgcacacgggtgagcggccctacaag
tgtaagatctgcggccgtgccttctctaccaatggcaacctcaaagctcattacggtgtc
catcgggccaacacgcccctcaagatgcagcactcctgccccatctgccagaagaagttc
accaatgctgtggttcttcagcagcacatccgcatgcatatgggaggccagatccccaac
acccccatgccagagacccagtttgaggcctttgaagaaattgactcctctctgcccgat
gagaagtccatggacaccaatggctttgcatgcatggaagaccaagacacagagcttgac
tctcaagaaaagccaagcaacacctcagattctctcgcaccatcttcctctgaggaactg
caccaacctaatcaggctcctccatcctctatgttctccagcatagctgctcaggagatc
cacatgaagaacctcccctcggctctcaacctgcaacgccaaagcggcactgccgcggag
tgtgatggagtgccccccaaagagtccccctcagcctccgagtgcatccgggagcaagag
taccagaacggccgcagccctgcaatctcagactctgtctccttccactcctcatcacca
gtcaacagccatgtaggcagcagccagtccaagtcccccgagtcagccatccctgaggat
tacacccaaaatgggcctagaacagactctgacagcagctctcaggatgccaatggagct
ctggacctgacggcacccagcttcaccccaaaaaccatcaaagaagagcctggcctgctc
ttcactaatggggagtatgctcccagccatttgcctccttttatgagggtgcctcccagt
ctggtcaaactggagaggcagattccgccagagatatccatgggcatgggccctctattt
gtctcccagatgccccagggagcgggagggcaaccacaggatggctccagtgctcaccgt
agatccagcaagcagcacctgtgtaactcctgtggcaaaaacttctcctctgccagcgcc
ctgcagatccatgagaggacccacactggcgagaagcccttcggctgcaccatctgtggc
agggccttcaccactaaaggcaacctcaaggtgcacgttggtactcacatgtggaacagc
tctgcgaggcgcggccagcgcctctctctggacaaccccatggccctgatggcgatgagc
tcagagtctggcaacatgatgccagatatgatgcctcctcccaaggaactgggtcctcct
ccgccaatgaacttcgaccagtctctgtggaaccagtacactgctgctttcaccaacggc
ctgtccatgaagactaacgagatctctgtgatccaaaatggcggaatgcccatgcctggt
agcctggccggtggtcctatggtccgctctactggaggcctgatgaaaatggattgctcc
cactctggcctgcctgccaccatggcagagatggaaaggaatggctctgagtgcgtggcc
agatctcagttccaacatttcatggaggaagggaaaattgcagtgaactag
DBGET
integrated database retrieval system