Coregonus clupeaformis (lake whitefish): 121545782
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Entry
121545782 CDS
T08357
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2-like isoform X2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04218
Cellular senescence
cclu04310
Wnt signaling pathway
cclu04370
VEGF signaling pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121545782
04370 VEGF signaling pathway
121545782
04020 Calcium signaling pathway
121545782
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121545782
09143 Cell growth and death
04218 Cellular senescence
121545782
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121545782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545782
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121545782
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
121545782
NCBI-ProteinID:
XP_041712542
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Position
30:complement(16114206..16164751)
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AA seq
914 aa
AA seq
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MSSFYDGKYPSELGLEEELSQVNCQDELEFDYLFEYEPPCHNIPGEHQDEPNLSSQRVLS
PASGLAYTLEEASPYSIKCSEHNPECLSGYEHLEAKNYLDHSRPGGIALSPRIEITPSRE
HYSHGRDSLQNHTLNISPRPTLTVPGHDSLAYREPQCLSPASSNSSTSWHSESYSPWASP
CVSPSSGQTGAGDLCPRFQNIHTGSPRTSPGTSPHTEEGCLGPRSPSPSLRPGSRSASPQ
GKRTYDMYRNPSLVTGIRSRSPSPHRGHEEHPQQNAGAHYGTPNSLAEAMNGYGTVQPGL
VPTKIVKTANQAYAFYPENHREVNYLVSCEQDAKNKTGAESFFVIPPIWTKQLVPNLCSI
PVSSLPPLEWPVPSCTDQYKLHVDVQPKPHHRAHYETEGSRGAVKTPTGGHPVVQLHGYR
GKEPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIINSTKVLEIPLEPKNDM
KAIIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQPNGQHISLQTASHPIEC
SQRSAHELPMVDKQDIDSCSVLGGQQMILTGRNFSSDSKVIFMEKTHDGQQIWEMEATVD
KDKCQPSLLFVEIPSYRDLSICHSAKVNFYVINGKRKRSQPQHFTFTPLAVPSIKTEPVD
DYPLSMTQILGVSPQSYYHHSPGFRGIIHPDNGLVSSMASCQQVRSGLPTPVPDTCFQQQ
SPAIVYSRGGKSLSGSPGGLYQQMGVMPDPHRTVLVHTGSPAQSSPLGAQQQQHGGGQGQ
HPSIIQFSPTNQHLLRGGDPPPLQPDKQQHIIYCDGYPQQSGAQAHSPISAHSPQHYPTT
VIQQQPYVPKGVPKGRSSPGGMEAQRCPPGEEQRASLPGGRVTVKEENLDQMYLDDVNEI
IRKDLTGVQARGQT
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgttttacgacggaaaataccctagtgagttagggttggaagaggaactgagt
caagtgaactgccaagatgagttggagtttgattacctgtttgaatacgaaccaccttgc
cacaacattcccggggaacatcaagatgagccaaatctctcctcacagagagtcctcagc
cctgcatctggtctggcctacaccctggaggaggcttccccctacagcattaagtgtagc
gagcacaacccagagtgcctctctggctatgagcacctggaggccaaaaactacctggac
cactctaggcctgggggtatcgccctgagccccaggatcgagatcacaccgtcgcgtgag
cactacagccatggacgagactccctgcagaaccacactctgaacatcagcccccggccc
accctgaccgtcccgggccacgacagcctggcctaccgtgagccccagtgcttgagcccg
gcctccagcaactcctccaccagttggcactcggagagctactccccctgggcctccccc
tgcgtgtcccctagtagtggccagaccggggccggggacctctgcccccgcttccagaac
atccacaccggctccccccgcacctccccaggcacctccccccacaccgaggagggctgc
ctcggcccccgctcgccctctccatccctcaggccaggatcccgctccgcttccccacag
ggaaaacgcacctacgacatgtacaggaaccccagcctggtcaccgggatccgctcccgc
agtccctccccccataggggccacgaggagcacccccaacagaacgcaggggcccactac
gggacccccaacagtctggctgaggctatgaacggctacggcactgtccagcctggtcta
gtccccaccaagatagtgaagacggccaaccaggcgtatgccttctacccagagaaccac
agggaggtcaactacctggtgtcctgtgagcaagatgctaagaataaaactggggccgaa
tccttctttgtgatccctcccatctggaccaagcagctggtccccaacctctgcagcatc
ccagtgtcttctctgccccctctggaatggcctgtccccagctgtacagaccagtacaag
ctccacgttgacgtgcagcccaagccccaccaccgagcccactatgagacagaggggagc
agaggtgcggtcaaaacccccactggtggtcatcctgtcgtccagttgcatggctacagg
ggaaaggagccactgggcctgcagatcttcatcgggacagcagatgagaggatcctgaag
ccccacgccttctaccaggttcaccgcatcacgggcaagacggtcaccaccaccagctac
gagaagatcatcaactccaccaaagtcctggagatccctctggagcccaagaacgacatg
aaagcaataatcgactgtgctgggatcctgaagctcaggaatgctgacattgagctaagg
aaaggcgagacggacatcggacggaagaacactcgtgtgcgtctagtgttccgtgtgcat
ataccccaacctaatgggcaacacatctcactgcaaaccgcctcccatcctattgagtgc
tcccagcggtccgcccatgagctgcccatggtggataaacaagacattgacagctgctct
gtcctgggaggtcagcagatgatcttgacgggacggaacttcagctccgactccaaggtc
atctttatggagaaaacccatgatggacagcagatttgggagatggaggcaaccgttgac
aaagataaatgtcagcctagtctgctgtttgttgagatcccctcttatcgcgacctgtcg
atctgccattctgccaaagtgaacttctatgtcatcaacggaaagaggaagcgcagccag
ccacagcacttcacattcactccactggcagtcccgtccattaaaacagagcctgtggat
gactatcctttatccatgacccagattctgggtgtgtccccccagtcctactaccaccac
agccctgggttccgtgggatcatccacccagacaacggcctggtctccagcatggcctcc
tgccagcaggtccgctcaggcctccccacccccgtcccagacacctgcttccagcagcag
agcccagccattgtgtactcccgtgggggcaagagtctgagcggcagtcctggagggctc
taccagcagatgggggtgatgcctgacccacaccgcaccgtcctggtccacacgggctcc
ccagcccagtcgtccccgctgggggcccagcagcagcagcatggagggggccagggccag
cacccctccatcatccagttctcccccaccaaccaacacctgctccggggaggcgaccct
ccacctctccagcctgacaagcagcagcacatcatctactgtgatggctaccctcagcag
tctggagcccaagctcactcccctatctcggcccactccccccaacattaccccaccacg
gtgatccagcagcagccctacgtgcccaagggggtgcccaagggcaggtcttcccctggt
gggatggaggcccagagatgcccccctggagaggagcagagagccagcctccctggagga
cgggtcacagtcaaggaggagaacctggatcagatgtaccttgatgacgtaaacgagatc
ataaggaaggatctgactggcgtgcaggccagaggtcagacatag
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