Coregonus clupeaformis (lake whitefish): 121545830
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Entry
121545830 CDS
T08357
Name
(RefSeq) homeobox protein Hox-C4a-like
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545830
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121545830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Auxin_canalis
DUF2209
Motif
Other DBs
NCBI-GeneID:
121545830
NCBI-ProteinID:
XP_041712619
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All DBs
Position
30:14824544..14828178
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AA seq
269 aa
AA seq
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MIMSSYLMDSTYIDPKFPPCEEYSQNSYIPEHSPEYYSRARDPGSGYQHHHQELYPPRAS
YQEGQYNCTSIPEPDTQRGHGLPHTAHLLAGKGQPASCETPQLPMSPTTPPAASSACNQA
TPEHPNSSASSKQPVVYPWMKKIHISTANPNYNGADSKRSRTAYTRQQVLELEKEFHYNR
YLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSSTTGISSGSNTTSST
GAVATSSATGAVIPNELSGGEDGEDITTL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagctcgtatttgatggactctacctacattgatccgaaatttcctccatgc
gaggaatattcgcaaaacagctacatccccgagcacagccccgaatattacagccgcgca
agggaccctggctctggttaccagcatcaccatcaggagttataccctccgcgggcgagc
taccaagagggccaatataactgtacaagcatccctgaacctgacacgcaaaggggacat
ggactaccccatactgcgcacctgcttgcagggaaagggcagccagcctcatgtgagacc
ccacagctgcccatgtcccccaccaccccaccggctgcatcctccgcctgcaaccaagct
acaccggagcatccaaacagctcagcctcctccaagcagcccgtggtatacccatggatg
aagaaaattcacatcagcaccgcgaacccgaattacaatggagcggattccaagcggtct
aggacagcctacactcgacagcaggtcttagaattggagaaggaattccactataaccgc
tatttaactcggcggaggcgcatcgagatagctcatacattggttctctccgaacgacaa
atcaaaatttggtttcagaaccgcaggatgaagtggaaaaaagaccataggcttcctaac
accaaagtgagatcctccaccacgggcatatcctccgggtccaacacaacctcatcaacc
ggcgctgtcgccacttcctcggccactggtgcggttattccaaatgaactttccggagga
gaggatggggaggatattacaacgttataa
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