Coregonus clupeaformis (lake whitefish): 121545831
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Entry
121545831 CDS
T08357
Name
(RefSeq) homeobox protein Hox-C9
KO
K09294
homeobox protein HoxB/C/D9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545831
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121545831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121545831
NCBI-ProteinID:
XP_041712620
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Position
30:14788216..14790938
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AA seq
272 aa
AA seq
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MHVKENGTIDMSTTSPICNYYVDSLIHHESEDVLAARFSAPGSHPTGPRPTSLVPECGDY
PSCSFSPKPPVFTTSWAPVHSQSSVVYHPYSHQPHLGTDSRYVRSWLEPISGAMSFPGYP
ANGRHYGLKPDAFQEHRAGDCLSSNGRTYTDYLYCTSADIREKNQTNIPSPETELLASGK
HKDEKPEIDPNNPVANWIHARSTRKKRCPYSKYQTLELEKEFLFNMYLTRDRRYEVARVL
NLTERQVKIWFQNRRMKMKKMNKEKTDANKEQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaaaagagaacggaaccatcgacatgtcgaccacgagtcccatatgtaattat
tatgtggattcattgatacaccatgaaagcgaggatgttcttgcggctcgattctcggct
cctggttcgcaccccaccggccctcgtccgacgtcccttgtaccggagtgtggtgactat
ccctcctgcagcttttccccgaaaccacccgtgtttactacctcttgggcccctgttcac
tcccagtcctcagtggtttaccacccatacagccaccaacctcatttaggaacggactca
aggtatgtgcggtcatggctagagccgatctcgggggccatgtccttccctggctaccca
gccaacggcagacactatgggctgaagcccgacgccttccaggagcatcgagccggtgac
tgcctctcctccaacggacgcacctacacggattatctctactgcacctccgctgacatt
cgagaaaagaaccaaacgaacatcccttctcccgagaccgagcttttggcttccggaaag
cataaagacgagaagccagaaatagatccgaataacccagtggcaaattggattcacgcg
cgttctacaaggaagaagcggtgcccttattcaaaataccagactctcgaactcgaaaag
gagtttttgttcaatatgtacctaaccagagaccgtcgatacgaggtggcaagagtcctc
aacctcactgagaggcaggtcaaaatatggttccagaaccggcggatgaagatgaagaaa
atgaacaaggaaaaaaccgacgcaaacaaagaacaataa
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